ENSG00000132541


Homo sapiens

Features
Gene ID: ENSG00000132541
  
Biological name :RIDA
  
Synonyms : P52758 / reactive intermediate imine deaminase A homolog / RIDA
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: -1
Band: q22.2
Gene start: 98102344
Gene end: 98117241
  
Corresponding Affymetrix probe sets: 203790_s_at (Human Genome U133 Plus 2.0 Array)   231705_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000254878
Ensembl peptide - ENSP00000430482
Ensembl peptide - ENSP00000429321
Ensembl peptide - ENSP00000428596
NCBI entrez gene - 10247     See in Manteia.
OMIM - 602487
RefSeq - NM_005836
RefSeq Peptide - NP_005827
swissprot - H0YBX3
swissprot - E5RIP8
swissprot - P52758
swissprot - A0A024R9H2
swissprot - H0YB34
Ensembl - ENSG00000132541
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ridaENSDARG00000035882Danio rerio
 RIDAENSGALG00000044554Gallus gallus
 RidaENSMUSG00000022323Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006056  RidA family
 IPR006175  YjgF/YER057c/UK114 family
 IPR019897  RidA, conserved site
 IPR035959  RutC-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001822 kidney development IEA
 biological_processGO:0007420 brain development IEA
 biological_processGO:0017148 negative regulation of translation ISS
 biological_processGO:0030324 lung development IEA
 biological_processGO:0033993 response to lipid IEA
 biological_processGO:0050680 negative regulation of epithelial cell proliferation IEA
 biological_processGO:0070314 G1 to G0 transition IEA
 biological_processGO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEA
 biological_processGO:1901565 organonitrogen compound catabolic process IDA
 biological_processGO:1902074 response to salt IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005759 mitochondrial matrix IEA
 cellular_componentGO:0005777 peroxisome ISS
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016892 endoribonuclease activity, producing 3"-phosphomonoesters ISS
 molecular_functionGO:0019239 deaminase activity IDA
 molecular_functionGO:0036041 long-chain fatty acid binding IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0043167 ion binding IEA
 molecular_functionGO:0046914 transition metal ion binding IEA
 molecular_functionGO:1904012 platinum binding IEA
 molecular_functionGO:1904013 xenon atom binding IEA


Pathways (from Reactome)
Pathway description
Threonine catabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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