ENSG00000132600


Homo sapiens

Features
Gene ID: ENSG00000132600
  
Biological name :PRMT7
  
Synonyms : PRMT7 / protein arginine methyltransferase 7 / Q9NVM4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: 1
Band: q22.1
Gene start: 68310974
Gene end: 68358563
  
Corresponding Affymetrix probe sets: 219408_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000456848
Ensembl peptide - ENSP00000456364
Ensembl peptide - ENSP00000457381
Ensembl peptide - ENSP00000343103
Ensembl peptide - ENSP00000409324
Ensembl peptide - ENSP00000414716
Ensembl peptide - ENSP00000454776
Ensembl peptide - ENSP00000454980
Ensembl peptide - ENSP00000455538
Ensembl peptide - ENSP00000455705
Ensembl peptide - ENSP00000456190
NCBI entrez gene - 54496     See in Manteia.
OMIM - 610087
RefSeq - XM_017023316
RefSeq - XM_017023303
RefSeq - XM_017023304
RefSeq - XM_017023305
RefSeq - XM_017023306
RefSeq - XM_017023307
RefSeq - XM_017023308
RefSeq - XM_017023309
RefSeq - XM_017023310
RefSeq - XM_017023311
RefSeq - XM_017023313
RefSeq - XM_017023314
RefSeq - XM_017023315
RefSeq - NM_001184824
RefSeq - NM_001290018
RefSeq - NM_019023
RefSeq - XM_011523112
RefSeq - XM_011523113
RefSeq - XM_011523115
RefSeq - XM_011523116
RefSeq - XM_011523121
RefSeq - XM_011523124
RefSeq - XM_011523125
RefSeq - XM_011523126
RefSeq - XM_011523128
RefSeq - XM_011523131
RefSeq - XM_017023290
RefSeq - XM_017023291
RefSeq - XM_017023292
RefSeq - XM_017023293
RefSeq - XM_017023294
RefSeq - XM_017023295
RefSeq - XM_017023296
RefSeq - XM_017023297
RefSeq - XM_017023298
RefSeq - XM_017023299
RefSeq - XM_017023300
RefSeq - XM_017023301
RefSeq - XM_017023302
RefSeq Peptide - NP_061896
RefSeq Peptide - NP_001171753
RefSeq Peptide - NP_001276947
swissprot - H3BRD3
swissprot - H3BRQ9
swissprot - H3BSS9
swissprot - H3BNC0
swissprot - Q9NVM4
swissprot - A0A024R726
swissprot - H3BTY1
swissprot - H3BNS2
swissprot - H3BPZ8
Ensembl - ENSG00000132600
  
Related genetic diseases (OMIM): 617157 - Short stature, brachydactyly, intellectual developmental disability, and seizures, 617157
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 prmt7ENSDARG00000051902Danio rerio
 PRMT7ENSGALG00000038865Gallus gallus
 Prmt7ENSMUSG00000060098Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PRMT9 / Q6P2P2 / protein arginine methyltransferase 9ENSG0000016416921


Protein motifs (from Interpro)
Interpro ID Name
 IPR014644  Protein arginine N-methyltransferase PRMT7
 IPR025799  Protein arginine N-methyltransferase
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000387 spliceosomal snRNP assembly IEA
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006349 regulation of gene expression by genetic imprinting IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IBA
 biological_processGO:0006479 protein methylation IEA
 biological_processGO:0016571 histone methylation IDA
 biological_processGO:0018216 peptidyl-arginine methylation IDA
 biological_processGO:0019918 peptidyl-arginine methylation, to symmetrical-dimethyl arginine IEA
 biological_processGO:0019919 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0032259 methylation IEA
 biological_processGO:0034969 histone arginine methylation IEA
 biological_processGO:0035246 peptidyl-arginine N-methylation IEA
 biological_processGO:0035247 peptidyl-arginine omega-N-methylation IEA
 biological_processGO:0043046 DNA methylation involved in gamete generation ISS
 biological_processGO:0043393 regulation of protein binding IC
 biological_processGO:0043985 histone H4-R3 methylation IEA
 cellular_componentGO:0001650 fibrillar center IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0008469 histone-arginine N-methyltransferase activity IDA
 molecular_functionGO:0008757 S-adenosylmethionine-dependent methyltransferase activity IDA
 molecular_functionGO:0016274 protein-arginine N-methyltransferase activity TAS
 molecular_functionGO:0016277 [myelin basic protein]-arginine N-methyltransferase activity IDA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0035241 protein-arginine omega-N monomethyltransferase activity IDA
 molecular_functionGO:0035242 protein-arginine omega-N asymmetric methyltransferase activity IBA
 molecular_functionGO:0035243 protein-arginine omega-N symmetric methyltransferase activity IMP
 molecular_functionGO:0042393 histone binding IC
 molecular_functionGO:0043021 ribonucleoprotein complex binding IPI
 molecular_functionGO:0044020 histone methyltransferase activity (H4-R3 specific) IEA


Pathways (from Reactome)
Pathway description
RMTs methylate histone arginines


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
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 HP:0000233 Thin vermillion border 
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000272 Malar hypoplasia "Underdeveloped midface region." [HPO:curators]
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 HP:0000278 Retrognathia 
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 HP:0000286 Epicanthus "An epicanthal fold is a semilunar fold of skin that extends from the upper eyelid across the medial canthal area to the lower eyelid." [HPO:curators]
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 HP:0000343 Long philtrum 
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 HP:0000431 Broad nasal bridge "Increased horizontal dimension of the upper, bony part of the nose." [HPO:curators]
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 HP:0000455 Broad nasal tip 
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 HP:0000470 Short neck 
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 HP:0000483 Astigmatism 
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000490 Deep set eyes 
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 HP:0000750 Impaired language development 
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 HP:0000852 Pseudohypoparathyroidism 
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 HP:0001156 Brachydactyly 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001513 Obesity "A status with BODY WEIGHT that is grossly above the acceptable or desirable weight, usually due to accumulation of excess FATS in the body. The standards may vary with age, sex, genetic or cultural background. In the BODY MASS INDEX, a BMI greater than 30.0 kg/m2 is considered obese, and a BMI greater than 40.0 kg/m2 is considered morbidly obese (MORBID OBESITY)." [MeSH:D009765]
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 HP:0002007 Frontal bossing "The presence of an unusually prominent forehead." [HPO:curators]
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 HP:0003593 Early onset 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0009891 Hypoplasia of the supraorbital ridges "Underdevelopment of the supraorbital ridges." [HPO:curators]
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 HP:0010049 Hypoplastic/short metacarpal bones 
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 HP:0010743 Hypoplasia of the metatarsal bones 
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 HP:0012448 Delayed myelination "`Delayed` (PATO:0000502) `myelination` (GO:0042552)." [ORCID:0000-0001-5208-3432]
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 HP:0012745 Short palpebral fissure "Distance between the medial and lateral canthi is more than 2 SD below the mean for age (objective); or, apparently reduced length of the palpebral fissures." [pmid:19125427]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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