ENSG00000133104


Homo sapiens

Features
Gene ID: ENSG00000133104
  
Biological name :SPART
  
Synonyms : Q8N0X7 / SPART / spartin
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 13
Strand: -1
Band: q13.3
Gene start: 36301638
Gene end: 36370180
  
Corresponding Affymetrix probe sets: 212526_at (Human Genome U133 Plus 2.0 Array)   216965_x_at (Human Genome U133 Plus 2.0 Array)   230775_s_at (Human Genome U133 Plus 2.0 Array)   236600_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000473599
Ensembl peptide - ENSP00000347314
Ensembl peptide - ENSP00000406061
Ensembl peptide - ENSP00000414147
NCBI entrez gene - 23111     See in Manteia.
OMIM - 607111
RefSeq - XM_011535012
RefSeq - NM_001142294
RefSeq - NM_001142295
RefSeq - NM_001142296
RefSeq - NM_015087
RefSeq - XM_005266313
RefSeq - XM_005266314
RefSeq - XM_005266315
RefSeq - XM_005266317
RefSeq Peptide - NP_001135766
RefSeq Peptide - NP_001135767
RefSeq Peptide - NP_001135768
RefSeq Peptide - NP_055902
swissprot - Q8N0X7
swissprot - A0A024RDV9
Ensembl - ENSG00000133104
  
Related genetic diseases (OMIM): 275900 - Troyer syndrome, 275900
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 spartaENSDARG00000068782Danio rerio
 spartbENSDARG00000103457Danio rerio
 SPARTENSGALG00000017053Gallus gallus
 Spg20ENSMUSG00000036580Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007330  MIT
 IPR009686  Senescence/spartin-associated
 IPR036181  MIT domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009838 abscission IMP
 biological_processGO:0030514 negative regulation of BMP signaling pathway IEA
 biological_processGO:0034389 lipid particle organization IEA
 biological_processGO:0048698 negative regulation of collateral sprouting in absence of injury IEA
 biological_processGO:0050905 neuromuscular process IEA
 biological_processGO:0051301 cell division IMP
 biological_processGO:0051881 regulation of mitochondrial membrane potential IMP
 biological_processGO:0060612 adipose tissue development IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005741 mitochondrial outer membrane IDA
 cellular_componentGO:0005811 lipid droplet IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0030496 midbody IEA
 cellular_componentGO:0045202 synapse IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0031625 ubiquitin protein ligase binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000126 Hydronephrosis 
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000286 Epicanthus "An epicanthal fold is a semilunar fold of skin that extends from the upper eyelid across the medial canthal area to the lower eyelid." [HPO:curators]
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 HP:0000316 Hypertelorism 
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000448 Prominent nose 
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 HP:0000494 Downward slanting palpebral fissures 
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 HP:0000709 Psychosis "A condition characterized by changes of personality and thought patterns often accompanied by hallucinations and delusional beliefs." [HPO:curators]
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 HP:0000712 Emotional lability 
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 HP:0000738 Hallucinations 
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 HP:0000739 Anxiety 
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 HP:0000750 Impaired language development 
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 HP:0001156 Brachydactyly 
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 HP:0001172 Abnormality of the thumb 
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 HP:0001256 Mental retardation, mild "Mild mental retardation is defined as an intelligence quotient (IQ) in the range of 50-69." [HPO:curators]
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 HP:0001258 Spastic paraplegia 
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001270 Motor retardation 
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 HP:0001272 Cerebellar atrophy 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001310 Dysmetria 
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 HP:0001317 Abnormality of the cerebellum 
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 HP:0001328 Learning disability 
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001350 Slurred speech 
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 HP:0001371 Contractures 
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 HP:0001382 Joint hypermobility "The ability of a joint to move beyond its normal range of motion." [HPO:curators]
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 HP:0001609 Hoarse voice 
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 HP:0001761 Pes cavus 
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 HP:0001765 Hammer toes 
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 HP:0001773 Short, broad feet "Abnormally short and wide feet." [HPO:curators]
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 HP:0002015 Dysphagia "Difficulty in swallowing." [HPO:curators]
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 HP:0002019 Constipation 
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 HP:0002064 Spastic gait 
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 HP:0002307 Drooling 
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 HP:0002313 Spastic paraparesis 
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 HP:0002355 Difficulty walking 
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 HP:0002360 Sleep disturbances "An abnormality of sleep including such phenomena as 1) insomnia/hypersomnia, 2) non-restorative sleep, 3) sleep schedule disorder, 4) excessive daytime somnolence, 5) sleep apnea, and 6) restlessness." [HPO:curators]
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 HP:0002464 Spastic dysarthria 
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 HP:0002495 Impaired vibratory sense "A decrease in the ability to perceive vibration. Clinically, this is usually tested with a tuning fork which vibrates at 128 Hz and is applied to bony prominences such as the malleoli at the ankles or the metacarpal-phalangeal joints. There is a slow decay of vibration from the tuning fork. The degree of vibratory sense loss can be crudely estimated by counting the number of seconds that the examiner can perceive the vibration longer than the patient." [HPO:curators]
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 HP:0002751 Kyphoscoliosis 
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 HP:0002857 Genu valgum 
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 HP:0003484 Upper limb involvement may occur later 
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 HP:0003487 Babinski sign "Upturning of the big toe (and sometimes fanning of the other toes) in response to stimulation of the sole of the foot. If the Babinski sign is present it can indicate damage to the corticospinal tract." [HPO:curators]
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 HP:0003693 Distal amyotrophy "Muscular atrophy affecting muscles in the distal portions of the extremities." [HPO:curators]
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0005288 Abnormality of the nares "Abnormality of the `nostril` (FMA:59645)." [HPO:curators]
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 HP:0005639 Hyperextensible hand joints "The ability of the joints of the hand to move beyond their normal range of motion." [HPO:curators]
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 HP:0005922 Abnormal hand morphology 
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 HP:0006986 Upper limb spasticity 
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 HP:0007340 Lower limb muscle weakness "Weakness of the muscles of the legs." [HPO:curators]
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 HP:0011094 Overbite "Maxillary teeth cover the mandibular teeth when biting to an increased degree." [HPO:ibailleulforestier]
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 HP:0011098 Speech apraxia "A type of apraxia that is characterized by difficulty or inability to execute speech movements because of problems with coordination and motor problems, leading to incorrect articulation. An increase of errors with increasing word and phrase length may occur." [HPO:probinson]
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 HP:0011448 Ankle clonus "Clonus is an involuntary tendon reflex that causes repeated flexion and extension of the foot. Ankle clonus is tested by rapidly flexing the foot upward." [HPO:probinson]
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 HP:0011449 Knee clonus ".Clonus is an involuntary tendon reflex that causes repeated flexion and extension of the foot. Knee clonus can be tested by rapidly pushing the patella towards the toes." [HPO:probinson]
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 HP:0011463 Childhood onset "Onset of disease at the age of between 1 and 5 years." [DDD:hfirth]
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 HP:0012371 Midface prominence "Anterior positioning of the infraorbital and perialar regions, or increased convexity of the face, or increased nasolabial angle." [pmid:19125436]
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 HP:0012385 Camptodactyly "The distal interphalangeal joint and/or the proximal interphalangeal joint of the fingers or toes cannot be extended to 180 degrees by either active or passive extension." [HPO:probinson]
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 HP:0025269 Panic attack "A sudden episode of intense fear in a situation in which there is no danger or apparent cause. The panic attack is accompanied by symptoms such as palpitations, sweating and chills or hot flushes. There may be a sensation of dyspnea (being out of breath), chest pain, or abdominal distress. Some indiviudals with panic attacks may experience depersonalization, a fear of going crazy, or a fear of dying." []
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 HP:0030084 Clinodactyly "An angulation of a digit at an interphalangeal joint in the plane of the palm (finger) or sole (toe)." [pmid:16252026]
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 HP:0100518 Dysuria "Painful or difficult `urination` (GO:0060073)." [HPO:probinson]
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 HP:0100543 Cognitive impairment "Abnormality in the process of thought including the ability to process information." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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