ENSG00000134668


Homo sapiens

Features
Gene ID: ENSG00000134668
  
Biological name :SPOCD1
  
Synonyms : Q6ZMY3 / SPOCD1 / SPOC domain containing 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: p35.2
Gene start: 31790422
Gene end: 31816051
  
Corresponding Affymetrix probe sets: 1562415_a_at (Human Genome U133 Plus 2.0 Array)   235417_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000435385
Ensembl peptide - ENSP00000435851
Ensembl peptide - ENSP00000437270
Ensembl peptide - ENSP00000437197
Ensembl peptide - ENSP00000436239
Ensembl peptide - ENSP00000257100
Ensembl peptide - ENSP00000353670
Ensembl peptide - ENSP00000399778
NCBI entrez gene - 90853     See in Manteia.
RefSeq - XM_017002782
RefSeq - NM_001281987
RefSeq - NM_001281988
RefSeq - NM_144569
RefSeq - XM_011542413
RefSeq - XM_011542414
RefSeq - XM_017002779
RefSeq - XM_017002780
RefSeq - XM_017002781
RefSeq Peptide - NP_001268917
RefSeq Peptide - NP_653170
RefSeq Peptide - NP_001268916
swissprot - E9PMX0
swissprot - H0YF46
swissprot - E9PKC3
swissprot - Q6ZMY3
swissprot - E9PQH7
swissprot - E9PPM7
Ensembl - ENSG00000134668
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Spocd1ENSMUSG00000028784Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DIDO1 / Q9BTC0 / death inducer-obliterator 1ENSG0000010119119
PHF3 / Q92576 / PHD finger protein 3ENSG0000011848218


Protein motifs (from Interpro)
Interpro ID Name
 IPR003618  Transcription elongation factor S-II, central domain
 IPR012921  Spen paralogue and orthologue SPOC, C-terminal
 IPR036575  Transcription elongation factor S-II, central domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0010923 negative regulation of phosphatase activity IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr