ENSG00000135931


Homo sapiens

Features
Gene ID: ENSG00000135931
  
Biological name :ARMC9
  
Synonyms : armadillo repeat containing 9 / ARMC9 / Q7Z3E5
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: 1
Band: q37.1
Gene start: 231198546
Gene end: 231374837
  
Corresponding Affymetrix probe sets: 219636_s_at (Human Genome U133 Plus 2.0 Array)   219637_at (Human Genome U133 Plus 2.0 Array)   220754_at (Human Genome U133 Plus 2.0 Array)   235938_at (Human Genome U133 Plus 2.0 Array)   240639_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000411778
Ensembl peptide - ENSP00000407146
Ensembl peptide - ENSP00000413932
Ensembl peptide - ENSP00000484804
Ensembl peptide - ENSP00000484241
Ensembl peptide - ENSP00000258417
Ensembl peptide - ENSP00000387391
Ensembl peptide - ENSP00000388527
Ensembl peptide - ENSP00000392086
NCBI entrez gene - 80210     See in Manteia.
OMIM - 617612
RefSeq - XM_017005026
RefSeq - XM_011511914
RefSeq - XM_011511915
RefSeq - XM_011511916
RefSeq - XM_017005018
RefSeq - XM_017005019
RefSeq - XM_017005020
RefSeq - XM_017005021
RefSeq - XM_017005022
RefSeq - XM_017005023
RefSeq - XM_017005024
RefSeq - XM_017005025
RefSeq - NM_001271466
RefSeq - NM_001291656
RefSeq - NM_025139
RefSeq - XM_011511905
RefSeq - XM_011511906
RefSeq - XM_011511907
RefSeq - XM_011511908
RefSeq - XM_011511909
RefSeq - XM_011511910
RefSeq - XM_011511911
RefSeq - XM_011511912
RefSeq - XM_011511913
RefSeq Peptide - NP_079415
RefSeq Peptide - NP_001258395
RefSeq Peptide - NP_001278585
swissprot - H7BZY2
swissprot - H7C2P6
swissprot - C9JW07
swissprot - Q7Z3E5
swissprot - A0A087X1I8
swissprot - H7C3U7
swissprot - C9J535
swissprot - H7BZA2
Ensembl - ENSG00000135931
  
Related genetic diseases (OMIM): 617622 - Joubert syndrome 30, 617622
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 armc9ENSDARG00000087299Danio rerio
 ARMC9ENSGALG00000007691Gallus gallus
 Armc9ENSMUSG00000062590Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006594  LIS1 homology motif
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005488 binding IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000202 Cleft lip/palate 
Show

 HP:0000238 Hydrocephalus 
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 HP:0000276 Long face 
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000426 Prominent nasal bridge 
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
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 HP:0000612 Iris coloboma "A `coloboma` (HP:0000589) of the `iris` (FMA:58235)." [HPO:probinson]
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
Show

 HP:0000657 Oculomotor apraxia 
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 HP:0000864 Abnormality of the hypothalamus-pituitary axis 
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 HP:0001161 Polydactyly (hands) 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
Show

 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
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 HP:0001320 Cerebellar vermis hypoplasia 
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 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
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 HP:0001696 Situs inversus "A left-right reversal (or "mirror reflection") of the anatomical location of the major thoracic and abdominal organs." [HPO:curators]
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 HP:0001829 Polydactyly (feet) 
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 HP:0002084 Encephalocele 
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 HP:0002104 Apnea "Lack of breathing with no movement of the respiratory muscles and no exchange of air in the lungs. This term refers to a disposition to have recurrent episodes of apnea rather than to a single event." [HPO:curators]
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 HP:0002126 Polymicrogyria "A congenital abnormality of the cerebral hemisphere characterized by an excessive number of small gyri (convolutions) on the surface of the brain." [HPO:curators]
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 HP:0002251 Congenital megacolon "An abnormality resulting from a lack of intestinal ganglion cells (i.e., an aganglionic section of bowel) that results in bowel obstruction with enlargement of the colon." [HPO:curators]
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 HP:0002553 Arched eyebrows 
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002876 Tachypnea, episodic 
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 HP:0003312 Abnormal form of the vertebral bodies 
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 HP:0004422 Biparietal narrowing "A narrowing of the biparietal diameter (i.e., of the transverse distance between the protuberances of the two parietal bones of the skull)." [HPO:curators]
Show

 HP:0007370 Aplasia/Hypoplasia of the corpus callosum "Absence or underdevelopment of the corpus callosum." [HPO:curators]
Show

 HP:0008872 Feeding problems in infancy 
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr