ENSG00000143951


Homo sapiens

Features
Gene ID: ENSG00000143951
  
Biological name :WDPCP
  
Synonyms : O95876 / WDPCP / WD repeat containing planar cell polarity effector
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: -1
Band: p15
Gene start: 63121383
Gene end: 63827843
  
Corresponding Affymetrix probe sets: 224180_x_at (Human Genome U133 Plus 2.0 Array)   231770_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000396226
Ensembl peptide - ENSP00000387222
Ensembl peptide - ENSP00000409982
Ensembl peptide - ENSP00000430288
Ensembl peptide - ENSP00000411429
Ensembl peptide - ENSP00000272321
Ensembl peptide - ENSP00000381552
Ensembl peptide - ENSP00000386592
Ensembl peptide - ENSP00000386769
Ensembl peptide - ENSP00000386795
NCBI entrez gene - 51057     See in Manteia.
OMIM - 613580
RefSeq - XM_017004254
RefSeq - XM_011532881
RefSeq - XM_011532884
RefSeq - XM_011532886
RefSeq - XM_011532887
RefSeq - XM_011532890
RefSeq - XM_011532891
RefSeq - XM_017004251
RefSeq - XM_017004252
RefSeq - XM_017004253
RefSeq - NM_001042692
RefSeq - NM_015910
RefSeq - XM_005264348
RefSeq Peptide - NP_001036157
RefSeq Peptide - NP_056994
swissprot - F8WBT2
swissprot - H7BZ13
swissprot - E9PFG9
swissprot - O95876
swissprot - A0A1D5RMS8
swissprot - H7C375
swissprot - C9JDS5
Ensembl - ENSG00000143951
  
Related genetic diseases (OMIM): 217085 - ?Congenital heart defects, hamartomas of tongue, and polysyndactyly, 217085
  615992 - ?Bardet-Biedl syndrome 15, 615992
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 wdpcpENSDARG00000074590Danio rerio
 WDPCPENSGALG00000008866Gallus gallus
 WdpcpENSMUSG00000020319Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR024511  WD repeat-containing and planar cell polarity effector protein Fritz
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001822 kidney development IEA
 biological_processGO:0002093 auditory receptor cell morphogenesis IEA
 biological_processGO:0007224 smoothened signaling pathway IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0010762 regulation of fibroblast migration IEA
 biological_processGO:0016476 regulation of embryonic cell shape ISS
 biological_processGO:0030030 cell projection organization IEA
 biological_processGO:0032185 septin cytoskeleton organization ISS
 biological_processGO:0032880 regulation of protein localization ISS
 biological_processGO:0042733 embryonic digit morphogenesis IEA
 biological_processGO:0043010 camera-type eye development IEA
 biological_processGO:0044782 cilium organization IEA
 biological_processGO:0045184 establishment of protein localization IEA
 biological_processGO:0048568 embryonic organ development IEA
 biological_processGO:0051893 regulation of focal adhesion assembly IEA
 biological_processGO:0055123 digestive system development IEA
 biological_processGO:0060021 roof of mouth development IEA
 biological_processGO:0060271 cilium assembly ISS
 biological_processGO:0060541 respiratory system development IEA
 biological_processGO:0072358 cardiovascular system development IEA
 biological_processGO:0090521 glomerular visceral epithelial cell migration IEA
 biological_processGO:1900027 regulation of ruffle assembly IEA
 biological_processGO:2000114 regulation of establishment of cell polarity IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005886 plasma membrane ISS
 cellular_componentGO:0005929 cilium IEA
 cellular_componentGO:0005930 axoneme ISS
 cellular_componentGO:0005938 cell cortex ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016324 apical plasma membrane ISS
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0097541 axonemal basal plate IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000003 Multicystic kidney "Multicystic dysplasia of the kidney is characterized by multiple cysts of varying size in the kidney and the absence of a normal pelvocaliceal system. The condition is associated with ureteral or ureteropelvic atresia, and the affected kidney is nonfunctional." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
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 HP:0000037 Male pseudohermaphroditism "Hermaphroditism refers to a discrepancy between the morphology of the gonads and that of the external genitalia. In male pseudohermaphroditism, the genotype is male (XY) and the external genitalia are imcompletely virilized, ambiguous, or complete female. If gonads are present, they are testes." [HPO:curators]
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 HP:0000068 Urethral atresia 
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 HP:0000073 Ureteral duplication "A developmental anomaly characterized by the presence of two, instead of one, ureter connecting a kidney to the bladder." [HPO:curators]
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 HP:0000100 Nephrotic syndrome 
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 HP:0000135 Hypogonadism "Reduced function of the gonads (testes in males or ovaries in females)." [HPO:curators]
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 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
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 HP:0000221 Furrowed tongue "Accentuation of the grooves on the dorsal surface of the tongue." [pmid:19125428]
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 HP:0000238 Hydrocephalus 
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000293 Full cheeks 
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 HP:0000316 Hypertelorism 
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 HP:0000340 Sloping forehead "A form of the forehead that slopes from top to bottom in an anterior direction." [HPO:curators]
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000365 Hearing loss 
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 HP:0000368 Low-set, posteriorly rotated ears 
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 HP:0000426 Prominent nasal bridge 
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 HP:0000457 Flat nose 
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 HP:0000470 Short neck 
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 HP:0000482 Microcornea "A congenital abnormality of the `cornea` (FMA:58238) in which the cornea and the anterior segment of the eye are smaller than normal. The horizontal diameter of the cornea does not reach 10 mm even in adulthood." [HPO:probinson]
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 HP:0000494 Downward slanting palpebral fissures 
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 HP:0000512 Abnormal electroretinogram "Any abnormality of the electrical responses of various cell types in the retina as measured by electroretinography." [HPO:curators]
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000528 Anophthalmia "Absence of a true eyeball." [HPO:curators]
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 HP:0000532 Chorioretinal abnormality 
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 HP:0000568 Microphthalmos "A developmental anomaly characterized by abnormal smallness of one or both eyes." [HPO:curators]
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 HP:0000580 Pigmentary retinopathy 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000647 Sclerocornea 
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 HP:0000648 Optic atrophy 
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 HP:0000822 Hypertension "High blood pressure." [HPO:curators]
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 HP:0001162 Postaxial polydactyly (hands) "Supernumerary digits located at the ulnar side of the hand." [HPO:curators]
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 HP:0001177 Preaxial polydactyly (hands) "Supernumerary digits located at the radial side of the hand. Polydactyly (supernumerary digits) involving the thumb occurs in many distinct forms of high variability and severity. Ranging from fleshy nubbins over varying degrees of partial duplication/splitting to completely duplicated or even triplicated thumbs or preaxial (on the radial side of the hand) supernumerary digits." [HPO:curators]
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 HP:0001233 2-3 finger syndactyly "`Syndactyly` (HP:0001159) with fusion of fingers two and three." [HPO:sdoelken]
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 HP:0001249 Mental retardation 
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 HP:0001305 Dandy-Walker malformation "A congenital brain malformation typically characterized by incomplete formation of the cerebellar vermis, dilation of the fourth ventricle, and enlargement of the posterior fossa. In layman s terms, Dandy Walker malformation is a cyst in the cerebellum (typically symmetrical) that is involved with the fourth ventricle. This may interfere with the body s ability to drain cerebrospinal fluid from the brain, resulting in hydrocephalus. Dandy Walker cysts are formed during early embryonic development, while the brain forms. The cyst in the cerebellum typically has several blood vessels running through it connecting to the brain, thereby prohibiting surgical removal." [HPO:curators]
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 HP:0001395 Hepatic fibrosis 
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 HP:0001513 Obesity "A status with BODY WEIGHT that is grossly above the acceptable or desirable weight, usually due to accumulation of excess FATS in the body. The standards may vary with age, sex, genetic or cultural background. In the BODY MASS INDEX, a BMI greater than 30.0 kg/m2 is considered obese, and a BMI greater than 40.0 kg/m2 is considered morbidly obese (MORBID OBESITY)." [MeSH:D009765]
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 HP:0001562 Oligohydramnios 
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 HP:0001643 Patent ductus arteriosus 
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 HP:0001674 Complete atrioventricular canal "A congenital malformation characterized by atrial septal defect, ventricular septal defect), and abnormalities of the tricuspid and mitral valves." [HPO:curators]
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 HP:0001680 Coarctation of aorta "Coarctation of the aorta is a narrowing or constriction of the aorta just distal to the origin of the left subclavian artery." [HPO:curators]
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 HP:0001682 Subaortic stenosis "A fixed form of obstruction to blood flow across the left-ventricular outflow tract related to stenosis (narrowing) below the level of the aortic valve." [HPO:curators]
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 HP:0001696 Situs inversus "A left-right reversal (or "mirror reflection") of the anatomical location of the major thoracic and abdominal organs." [HPO:curators]
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 HP:0001737 Pancreatic cysts 
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 HP:0001746 Asplenia "Absence (aplasia) of the spleen." [HPO:curators]
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 HP:0001747 Accessory spleen "An accessory spleen is a round, iso-echogenic, homogenic and smooth structure and is seen as a normal varient mostly on the medial contour of the spleen, near the hilus or around the lower pole. This has no pathogenic relevance." [HPO:curators]
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 HP:0001830 Postaxial polydactyly (feet) "Polydactyly of the foot most commonly refers to the presence of six toes on one foot. Postaxial polydactyly affects the lateral ray and the duplication may range from a well-formed articulated digit to a rudimentary digit." [HPO:curators]
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 HP:0001883 Talipes 
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 HP:0002084 Encephalocele 
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 HP:0002167 Neurological speech impairment 
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 HP:0002230 Generalized hirsutism "Abnormally increased hair growth over much of the entire body." [HPO:curators]
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 HP:0002323 Anencephaly 
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 HP:0002612 Congenital hepatic fibrosis 
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 HP:0003202 Amyotrophy "The presence of muscular atrophy (which is also known as amyotrophy)." [HPO:curators]
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0006101 Finger syndactyly "Webbing or fusion of the fingers, involving soft parts only or including bone structure. Bony fusions are revered to as "bony" Syndactyly if the fusion occurs in a radio-ulnar axis. Fusions of bones of the fingers in a proximo-distal axis are refered to as "Symphalangism"." [HPO:curators]
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 HP:0006487 Bowing of the long bones 
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 HP:0006706 Cystic liver disease 
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 HP:0006870 Lobar holoprosencephaly "A type of holoprosencephaly in which most of the right and left cerebral hemispheres and lateral ventricles are separated but the most rostral aspect of the telencephalon, the frontal lobes, are fused, especially ventrally." [gc:hpe]
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 HP:0007370 Aplasia/Hypoplasia of the corpus callosum "Absence or underdevelopment of the corpus callosum." [HPO:curators]
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 HP:0008053 Aplasia/Hypoplasia of the iris "Absence or underdevelopment of the iris." [HPO:curators]
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 HP:0008724 Hypoplastic ovary 
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 HP:0008736 Hypoplasia of penis 
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 HP:0010055 Broad hallux 
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 HP:0010295 Aplasia/Hypoplasia of the tongue "Absence or underdevelopment of the tongue." [HPO:curators]
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 HP:0010459 True hermaphroditism "The presence of both ovarian and testicular tissues either in the same or in opposite gonads. Affected persons have ambiguous genitalia and may have 46,XX or 46,XY karyotypes or 46,XX/XY mosaicism." [HPO:curators]
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 HP:0010747 Medial flaring of the eyebrow "An abnormal distribution of eyebrow hair growth in the medial direction." [HPO:probinson]
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 HP:0011802 Hamartoma of tongue 
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 HP:0100732 Pancreatic fibrosis 
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 HP:0100835 Benign neoplasm of the central nervous system 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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