ENSG00000144455


Homo sapiens

Features
Gene ID: ENSG00000144455
  
Biological name :SUMF1
  
Synonyms : Q8NBK3 / sulfatase modifying factor 1 / SUMF1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: -1
Band: p26.1
Gene start: 3700814
Gene end: 4467281
  
Corresponding Affymetrix probe sets: 226850_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000272902
Ensembl peptide - ENSP00000384977
Ensembl peptide - ENSP00000404384
Ensembl peptide - ENSP00000410060
Ensembl peptide - ENSP00000373355
NCBI entrez gene - 285362     See in Manteia.
OMIM - 607939
RefSeq - XM_017006255
RefSeq - XM_011533624
RefSeq - XM_011533625
RefSeq - XM_011533626
RefSeq - XM_017006252
RefSeq - XM_017006253
RefSeq - XM_017006254
RefSeq - NM_001164674
RefSeq - NM_001164675
RefSeq - NM_182760
RefSeq Peptide - NP_877437
RefSeq Peptide - NP_001158146
RefSeq Peptide - NP_001158147
swissprot - F5GXA0
swissprot - Q8NBK3
swissprot - E9PF05
Ensembl - ENSG00000144455
  
Related genetic diseases (OMIM): 272200 - Multiple sulfatase deficiency, 272200
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sumf1ENSDARG00000044203Danio rerio
 SUMF1ENSGALG00000008286Gallus gallus
 Sumf1ENSMUSG00000030101Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SUMF2 / Q8NBJ7 / sulfatase modifying factor 2ENSG0000012910333


Protein motifs (from Interpro)
Interpro ID Name
 IPR005532  Sulfatase-modifying factor enzyme
 IPR016187  C-type lectin fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006687 glycosphingolipid metabolic process TAS
 biological_processGO:0043687 post-translational protein modification TAS
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005783 endoplasmic reticulum IBA
 cellular_componentGO:0005788 endoplasmic reticulum lumen TAS
 molecular_functionGO:0016491 oxidoreductase activity TAS
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Glycosphingolipid metabolism
The activation of arylsulfatases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000238 Hydrocephalus 
Show

 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
Show

 HP:0000256 Macrocephaly "The presence of an abnormally large `skull` (FMA:46565)." [HPO:probinson]
Show

 HP:0000280 Coarse facial features 
Show

 HP:0000319 Flat philtrum 
Show

 HP:0000365 Hearing loss 
Show

 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
Show

 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
Show

 HP:0000505 Impaired vision 
Show

 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
Show

 HP:0000546 Retinal degeneration 
Show

 HP:0000574 Thick eyebrows 
Show

 HP:0000648 Optic atrophy 
Show

 HP:0000943 Dysostosis multiplex 
Show

 HP:0001249 Mental retardation 
Show

 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
Show

 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
Show

 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
Show

 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
Show

 HP:0001272 Cerebellar atrophy 
Show

 HP:0001319 Neonatal hypotonia "Muscular hypotonia (abnormally low muscle tone) manifesting in the neonatal period." [HPO:curators]
Show

 HP:0001387 Joint stiffness "Joint stiffness is a perceived sensation of tightness in a joint or joints when attempting to move them after a period of inactivity. Joint stiffness typically subsides over time." [HPO:curators]
Show

 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
Show

 HP:0002003 Large forehead 
Show

 HP:0002059 Cerebral atrophy 
Show

 HP:0002119 Ventriculomegaly 
Show

 HP:0002208 Coarse hair 
Show

 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
Show

 HP:0002376 Developmental regression 
Show

 HP:0002395 Lower limb hyperreflexia 
Show

 HP:0002518 Periventricular white matter changes 
Show

 HP:0002922 Increased CSF protein 
Show

 HP:0003134 Abnormal motor and sensory nerve conduction 
Show

 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
Show

 HP:0005280 Depressed nasal root and bridge 
Show

 HP:0007305 Cns demyelination 
Show

 HP:0007307 Rapid neurologic deterioration 
Show

 HP:0007703 Abnormal retinal pigmentation 
Show

 HP:0007957 Variable degree of corneal opacities 
Show

 HP:0008064 Ichthyosiform abnormality of the skin 
Show

 HP:0008155 Acid mucopolysacchariduria 
Show

 HP:0008479 Hypoplastic vertebral bodies 
Show

 HP:0010055 Broad hallux 
Show

 HP:0010059 Broad phalanges of the hallux 
Show

 HP:0011096 Peripheral demyelination "A loss of myelin from the internode regions along myelinated nerve fibers of the peripheral nervous system." [HPO:probinson]
Show

 HP:0011220 Prominent forehead "Forward prominence of the entire forehead, due to protrusion of the frontal bone." [pmid:19125436]
Show

 HP:0011304 Broad thumb "Increased thumb width without increased dorso-ventral dimension." [pmid:19125433]
Show

 HP:0012368 Flat face "Absence of concavity or convexity of the face when viewed in profile." [pmid:19125436]
Show

 HP:0100539 Periorbital edema 
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000129103 SUMF2 / Q8NBJ7 / sulfatase modifying factor 2  / reaction / complex






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr