ENSG00000149308


Homo sapiens

Features
Gene ID: ENSG00000149308
  
Biological name :NPAT
  
Synonyms : NPAT / nuclear protein, coactivator of histone transcription / Q14207
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: -1
Band: q22.3
Gene start: 108157215
Gene end: 108222642
  
Corresponding Affymetrix probe sets: 209798_at (Human Genome U133 Plus 2.0 Array)   211584_s_at (Human Genome U133 Plus 2.0 Array)   211585_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000436510
Ensembl peptide - ENSP00000278612
Ensembl peptide - ENSP00000433497
NCBI entrez gene - 4863     See in Manteia.
OMIM - 601448
RefSeq - XM_017017803
RefSeq - NM_001321307
RefSeq - NM_002519
RefSeq - XM_011542854
RefSeq - XM_017017802
RefSeq Peptide - NP_002510
RefSeq Peptide - NP_001308236
swissprot - H0YET3
swissprot - Q14207
swissprot - E9PKJ1
Ensembl - ENSG00000149308
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 npatENSDARG00000055548Danio rerio
 NPATENSGALG00000017162Gallus gallus
 NpatENSMUSG00000033054Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006594  LIS1 homology motif
 IPR031442  Protein NPAT, C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000083 regulation of transcription involved in G1/S transition of mitotic cell cycle IMP
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0010468 regulation of gene expression IMP
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IDA
 biological_processGO:1903507 negative regulation of nucleic acid-templated transcription IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0015030 Cajal body IEA
 cellular_componentGO:0097504 Gemini of coiled bodies IDA
 molecular_functionGO:0003713 transcription coactivator activity IMP
 molecular_functionGO:0003714 transcription corepressor activity IMP
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008022 protein C-terminus binding IPI
 molecular_functionGO:0047485 protein N-terminus binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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