ENSG00000149743


Homo sapiens

Features
Gene ID: ENSG00000149743
  
Biological name :TRPT1
  
Synonyms : Q86TN4 / tRNA phosphotransferase 1 / TRPT1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: -1
Band: q13.1
Gene start: 64223799
Gene end: 64226254
  
Corresponding Affymetrix probe sets: 223436_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000442066
Ensembl peptide - ENSP00000439586
Ensembl peptide - ENSP00000445292
Ensembl peptide - ENSP00000314073
Ensembl peptide - ENSP00000378050
Ensembl peptide - ENSP00000378051
Ensembl peptide - ENSP00000437741
Ensembl peptide - ENSP00000438683
NCBI entrez gene - 83707     See in Manteia.
OMIM - 610470
RefSeq - XM_017018401
RefSeq - NM_001033678
RefSeq - NM_001160389
RefSeq - NM_001160390
RefSeq - NM_001160392
RefSeq - NM_001160393
RefSeq - NM_031472
RefSeq - XM_005274345
RefSeq - XM_005274346
RefSeq - XM_005274347
RefSeq - XM_006718706
RefSeq - XM_006718707
RefSeq - XM_017018400
RefSeq Peptide - NP_001153861
RefSeq Peptide - NP_001153864
RefSeq Peptide - NP_001153865
RefSeq Peptide - NP_001317227
RefSeq Peptide - NP_113660
RefSeq Peptide - NP_001028850
RefSeq Peptide - NP_001153862
swissprot - F5H1K3
swissprot - F5H6B6
swissprot - F5H8A0
swissprot - H0YGY9
swissprot - Q86TN4
swissprot - A0A024R5C2
Ensembl - ENSG00000149743
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trpt1ENSDARG00000037628Danio rerio
 Trpt1ENSMUSG00000047656Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002745  Phosphotransferase KptA/Tpt1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEA
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0008150 biological_process ND
 biological_processGO:0045859 regulation of protein kinase activity IEA
 molecular_functionGO:0000215 tRNA 2"-phosphotransferase activity IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016772 transferase activity, transferring phosphorus-containing groups IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr