ENSG00000156738


Homo sapiens

Features
Gene ID: ENSG00000156738
  
Biological name :MS4A1
  
Synonyms : membrane spanning 4-domains A1 / MS4A1 / P11836
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: 1
Band: q12.2
Gene start: 60455752
Gene end: 60470760
  
Corresponding Affymetrix probe sets: 210356_x_at (Human Genome U133 Plus 2.0 Array)   217418_x_at (Human Genome U133 Plus 2.0 Array)   228592_at (Human Genome U133 Plus 2.0 Array)   228599_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000432219
Ensembl peptide - ENSP00000432270
Ensembl peptide - ENSP00000437002
Ensembl peptide - ENSP00000433519
Ensembl peptide - ENSP00000433277
Ensembl peptide - ENSP00000433179
Ensembl peptide - ENSP00000314620
Ensembl peptide - ENSP00000374589
NCBI entrez gene - 931     See in Manteia.
OMIM - 112210
RefSeq - NM_152866
RefSeq - NM_021950
RefSeq Peptide - NP_068769
RefSeq Peptide - NP_690605
swissprot - E9PPL6
swissprot - P11836
swissprot - E9PKH8
swissprot - A0A1Y8EK32
swissprot - A0A024R507
Ensembl - ENSG00000156738
  
Related genetic diseases (OMIM): 613495 - Immunodeficiency, common variable, 5, 613495
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Ms4a1ENSMUSG00000024673Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007237  CD20-like family
 IPR030417  Membrane-spanning 4-domains subfamily A
 IPR030418  B-lymphocyte antigen CD20


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006959 humoral immune response NAS
 biological_processGO:0042100 B cell proliferation NAS
 biological_processGO:0042113 B cell activation IEA
 cellular_componentGO:0005615 extracellular space HDA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane NAS
 cellular_componentGO:0009897 external side of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005154 epidermal growth factor receptor binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0023026 MHC class II protein complex binding HDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000248 Brachycephaly "Brachycephaly refers to a short, wide head, which is often caused by premature closure of both coronal sutures." [HPO:curators]
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 HP:0000389 Chronic otitis media 
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 HP:0000979 Purpura 
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 HP:0001531 Failure to thrive in infancy 
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 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
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 HP:0001878 Hemolytic anemia 
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 HP:0001888 Lymphopenia 
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 HP:0001973 Immune thrombocytopenia 
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 HP:0002023 Anal atresia "Congenital absence of the anus, i.e., the opening at the bottom end of the intestinal tract." [HPO:curators]
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 HP:0002090 Pneumonia 
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 HP:0002091 Restrictive lung disease 
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 HP:0002097 Emphysema 
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 HP:0002110 Bronchiectasis 
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 HP:0002205 Recurrent respiratory infections 
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 HP:0002633 Vasculitis 
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 HP:0002665 Lymphoma "A cancer originating in lymphocytes and presenting as a solid tumor of lymhpoid cells." [HPO:curators]
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 HP:0002716 Lymphadenopathy 
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 HP:0002718 Recurrent bacterial infections 
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 HP:0002721 Immunodeficiency 
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 HP:0002829 Arthralgia 
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 HP:0002837 Bronchitis 
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 HP:0002910 Elevated transaminases "Elevations of the levels of SGOT and SGPT in the serum. SGOT (serum glutamic oxaloacetic transaminase) and SGPT (serum glutamic pyruvic transaminase) are transaminases primarily found in the liver and heart and are released into the bloodstream as the result of liver or heart damage. SGOT and SGPT are used clinically mainly as markers of liver damage." [HPO:curators]
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 HP:0004313 Reduced immunoglobulin levels 
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 HP:0006783 Posterior pharyngeal cleft 
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 HP:0100723 Gastrointestinal stroma tumor 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr