ENSG00000157184


Homo sapiens

Features
Gene ID: ENSG00000157184
  
Biological name :CPT2
  
Synonyms : carnitine palmitoyltransferase 2 / CPT2 / P23786
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: p32.3
Gene start: 53196429
Gene end: 53214197
  
Corresponding Affymetrix probe sets: 204263_s_at (Human Genome U133 Plus 2.0 Array)   204264_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000360541
Ensembl peptide - ENSP00000490867
Ensembl peptide - ENSP00000490492
Ensembl peptide - ENSP00000490399
Ensembl peptide - ENSP00000490066
Ensembl peptide - ENSP00000490042
Ensembl peptide - ENSP00000489757
Ensembl peptide - ENSP00000489756
Ensembl peptide - ENSP00000489631
NCBI entrez gene - 1376     See in Manteia.
OMIM - 600650
RefSeq - NM_000098
RefSeq - XM_005270484
RefSeq Peptide - NP_000089
RefSeq Peptide - NP_001317518
swissprot - A0A1B0GTM0
swissprot - A0A1B0GTL9
swissprot - A0A1B0GWC0
swissprot - A0A140VK13
swissprot - P23786
swissprot - A0A1B0GTB8
swissprot - A0A1B0GVF3
swissprot - A0A1B0GV75
swissprot - A0A1B0GUD9
swissprot - A0A1B0GUB8
Ensembl - ENSG00000157184
  
Related genetic diseases (OMIM): 255110 - CPT II deficiency, myopathic, stress-induced, 255110
  600649 - CPT II deficiency, infantile, 600649
  608836 - CPT II deficiency, lethal neonatal, 608836
  614212 - {Encephalopathy, acute, infection-induced, 4, susceptibility to}, 614212
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cpt2ENSDARG00000038618Danio rerio
 CPT2ENSGALG00000010681Gallus gallus
 Cpt2ENSMUSG00000028607Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000542  Acyltransferase ChoActase/COT/CPT


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006631 fatty acid metabolic process IEA
 biological_processGO:0006635 fatty acid beta-oxidation IEA
 biological_processGO:0006853 carnitine shuttle TAS
 biological_processGO:0019216 regulation of lipid metabolic process TAS
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0005743 mitochondrial inner membrane TAS
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0004095 carnitine O-palmitoyltransferase activity EXP
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016746 transferase activity, transferring acyl groups IEA


Pathways (from Reactome)
Pathway description
PPARA activates gene expression
Import of palmitoyl-CoA into the mitochondrial matrix


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000003 Multicystic kidney "Multicystic dysplasia of the kidney is characterized by multiple cysts of varying size in the kidney and the absence of a normal pelvocaliceal system. The condition is associated with ureteral or ureteropelvic atresia, and the affected kidney is nonfunctional." [HPO:curators]
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 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000073 Ureteral duplication "A developmental anomaly characterized by the presence of two, instead of one, ureter connecting a kidney to the bladder." [HPO:curators]
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 HP:0000083 Renal failure 
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 HP:0000105 Enlarged kidneys 
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 HP:0000113 Polycystic kidney 
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 HP:0000126 Hydronephrosis 
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 HP:0000189 Narrow palate "Width of the palate more than 2 SD below the mean (objective) or apparently decreased palatal width (subjective)." [pmid:19125428]
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 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000340 Sloping forehead "A form of the forehead that slopes from top to bottom in an anterior direction." [HPO:curators]
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 HP:0000348 High forehead "An abnormally increased height of the forehead." [HPO:curators]
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 HP:0000358 Posteriorly rotated ears "A type of `abnormal location of the ears` (HP:0000357) in which the position of the ears is characterized by posterior rotation (the superior part of the ears is rotated towards the back of the head, and the inferior part of the ears towards the front)." [HPO:probinson]
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000396 Overfolded helices "A condition in which the upper edge of the ear is folded over to a greater degree than normal." [HPO:curators]
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 HP:0000414 Bulbous nose 
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0001182 Tapered fingers 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001254 Lethargy 
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 HP:0001259 Coma 
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 HP:0001274 Agenesis of corpus callosum "Absence of the corpus callosum as a result of the failure of the corpus callosum to develop, which can be the result of a failure in any one of the multiple steps of callosal development including cellular proliferation and migration, axonal growth or glial patterning at the midline." [HPO:curators]
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 HP:0001319 Neonatal hypotonia "Muscular hypotonia (abnormally low muscle tone) manifesting in the neonatal period." [HPO:curators]
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 HP:0001324 Muscle weakness "Reduced strength of muscles." [HPO:curators]
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 HP:0001399 Hepatic failure 
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 HP:0001403 Macrovesicular steatosis 
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 HP:0001522 Death in infancy 
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 HP:0001562 Oligohydramnios 
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 HP:0001638 Cardiomyopathy 
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 HP:0001640 Cardiomegaly 
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 HP:0001644 Dilated cardiomyopathy 
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 HP:0001760 Abnormality of the feet "An abnormality of the feet (foot deformity) is a disorder of the foot that can either be congenital or acquired. Such deformities can include hammer toe, club foot deformity, flat feet, pes cavus, Congenital vertical talus (rocker bottom foot) & etc." [HPO:curators]
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 HP:0001800 Hypoplastic toenails "Underdeveloped toenails." [HPO:curators]
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 HP:0001958 Nonketotic hypoglycemia 
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 HP:0001985 Hypoketotic hypoglycemia 
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 HP:0001987 Hyperammonemia 
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 HP:0002013 Vomiting 
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 HP:0002017 Nausea and vomiting 
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 HP:0002093 Respiratory insufficiency 
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 HP:0002098 Respiratory distress 
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 HP:0002104 Apnea "Lack of breathing with no movement of the respiratory muscles and no exchange of air in the lungs. This term refers to a disposition to have recurrent episodes of apnea rather than to a single event." [HPO:curators]
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 HP:0002119 Ventriculomegaly 
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 HP:0002126 Polymicrogyria "A congenital abnormality of the cerebral hemisphere characterized by an excessive number of small gyri (convolutions) on the surface of the brain." [HPO:curators]
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002878 Early respiratory failure 
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 HP:0002910 Elevated transaminases "Elevations of the levels of SGOT and SGPT in the serum. SGOT (serum glutamic oxaloacetic transaminase) and SGPT (serum glutamic pyruvic transaminase) are transaminases primarily found in the liver and heart and are released into the bloodstream as the result of liver or heart damage. SGOT and SGPT are used clinically mainly as markers of liver damage." [HPO:curators]
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 HP:0002913 Myoglobinuria 
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 HP:0002987 Elbow contractures 
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 HP:0003198 Myopathy 
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 HP:0003201 Rhabdomyolysis 
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 HP:0003236 Elevated serum creatine phosphokinase 
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 HP:0003326 Myalgia "A tendency to experience muscle pain." [HPO:curators]
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 HP:0003394 Muscle cramps 
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 HP:0003455 Elevated long chain fatty acids 
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 HP:0003552 Muscle stiffness 
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 HP:0003573 Increased total bilirubin 
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 HP:0003593 Early onset 
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 HP:0005943 Respiratory arrest 
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 HP:0006380 Knee flexion deformities 
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 HP:0006559 Liver calcifications 
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 HP:0006610 Wide intermamillary distance 
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 HP:0006799 Basal ganglia cysts 
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 HP:0007023 Antenatal intracerebral hemorrhage 
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 HP:0007229 Intracerebral periventricular calcifications 
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 HP:0008293 Long-chain dicarboxylic aciduria 
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 HP:0008315 Decreased plasma total and free carnitine 
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 HP:0008872 Feeding problems in infancy 
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 HP:0009058 Lipid accumulation in skeletal muscle "An abnormal accumulation of lipids in skeletal muscle." [HPO:curators]
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 HP:0010511 Increased length of toes "The presence of abnormally long toes." [HPO:curators]
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 HP:0011220 Prominent forehead "Forward prominence of the entire forehead, due to protrusion of the frontal bone." [pmid:19125436]
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 HP:0011309 Tapered toe "The gradual reduction in girth of the digit from proximal to distal." [pmid:19125433]
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 HP:0011675 Arrhythmia "Any cardiac rhythm other than the normal sinus rhythm. Such a rhythm may be either of sinus or ectopic origin and either regular or irregular. An arrhythmia may be due to a disturbance in impulse formation or conduction or both." [DDD:dbrown, pmid:19063792]
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 HP:0011936 Decreased plasma total carnitine "A decreased concentration of total `carnitine` (CHEBI:17126) in the `blood` (FMA:9670)." [HPO:probinson]
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 HP:0012378 Fatigue "A subjective feeling of tiredness characterized by a lack of energy and motivation." [HPO:probinson]
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 HP:0012639 Abnormality of nervous system morphology "A structural anomaly of the `nervous system` (FMA:7157)." [HPO:probinson]
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 HP:0045016 Elevated serum long-chain fatty acids 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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