ENSG00000158813


Homo sapiens

Features
Gene ID: ENSG00000158813
  
Biological name :EDA
  
Synonyms : ectodysplasin A / EDA / Q92838
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: 1
Band: q13.1
Gene start: 69616067
Gene end: 70039469
  
Corresponding Affymetrix probe sets: 206217_at (Human Genome U133 Plus 2.0 Array)   211127_x_at (Human Genome U133 Plus 2.0 Array)   211128_at (Human Genome U133 Plus 2.0 Array)   211129_x_at (Human Genome U133 Plus 2.0 Array)   211130_x_at (Human Genome U133 Plus 2.0 Array)   211131_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000432585
Ensembl peptide - ENSP00000423037
Ensembl peptide - ENSP00000434195
Ensembl peptide - ENSP00000481963
Ensembl peptide - ENSP00000434861
Ensembl peptide - ENSP00000340611
Ensembl peptide - ENSP00000363680
Ensembl peptide - ENSP00000363681
NCBI entrez gene - 1896     See in Manteia.
OMIM - 300451
RefSeq - XM_017029336
RefSeq - NM_001005609
RefSeq - NM_001005610
RefSeq - NM_001005612
RefSeq - NM_001005613
RefSeq - NM_001399
RefSeq - XM_006724630
RefSeq - XM_011530885
RefSeq Peptide - NP_001005609
RefSeq Peptide - NP_001005610
RefSeq Peptide - NP_001005612
RefSeq Peptide - NP_001005613
RefSeq Peptide - NP_001390
swissprot - Q92838
swissprot - D6RA95
swissprot - A0A0U5J797
swissprot - A0A0C4DGX3
Ensembl - ENSG00000158813
  
Related genetic diseases (OMIM): 305100 - Ectodermal dysplasia 1, hypohidrotic, X-linked, 305100
  313500 - Tooth agenesis, selective, X-linked 1, 313500
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 edaENSDARG00000074591Danio rerio
 EDAENSGALG00000035966Gallus gallus
 EdaENSMUSG00000059327Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006052  Tumour necrosis factor domain
 IPR008160  Collagen triple helix repeat
 IPR008983  Tumour necrosis factor-like domain superfamily
 IPR016133  Insect cysteine-rich antifreeze protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001942 hair follicle development IEA
 biological_processGO:0006955 immune response IEA
 biological_processGO:0007160 cell-matrix adhesion IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0010467 gene expression IEA
 biological_processGO:0010628 positive regulation of gene expression IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0033209 tumor necrosis factor-mediated signaling pathway TAS
 biological_processGO:0042475 odontogenesis of dentin-containing tooth IMP
 biological_processGO:0043123 positive regulation of I-kappaB kinase/NF-kappaB signaling IEA
 biological_processGO:0043473 pigmentation IEA
 biological_processGO:0043588 skin development IEA
 biological_processGO:0051092 positive regulation of NF-kappaB transcription factor activity IDA
 biological_processGO:0060662 salivary gland cavitation IEA
 biological_processGO:0060789 hair follicle placode formation IEA
 biological_processGO:0061153 trachea gland development IEA
 biological_processGO:0090263 positive regulation of canonical Wnt signaling pathway IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005581 collagen trimer IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0005811 lipid droplet IDA
 cellular_componentGO:0005856 cytoskeleton TAS
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane TAS
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 cellular_componentGO:0045177 apical part of cell IEA
 molecular_functionGO:0005102 signaling receptor binding IDA
 molecular_functionGO:0005164 tumor necrosis factor receptor binding IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
TNFs bind their physiological receptors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000232 Everted lower lip 
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 HP:0000327 Hypoplasia of the maxilla "Underdevelopment of the `Maxilla` (FMA:9711)." [HPO:probinson]
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 HP:0000331 Small chin 
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 HP:0000336 Prominent supraorbital ridges "Abnormal prominence of the supraorbital ridges, which are bony ridge located above the eye sockets in the area of the eyebrows." [HPO:curators]
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000430 Hypoplastic nasal alae "Thinned, deficient, or excessively arched `ala nasi` (FMA:59519)." [pmid:19152422]
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 HP:0000457 Flat nose 
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 HP:0000535 Sparse eyebrows 
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 HP:0000607 Periorbital wrinkles 
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 HP:0000653 Sparse eyelashes "Decreased density/number of eyelashes." [pmid:19125427]
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 HP:0000668 Hypodontia "Hypodontia describes a situation when there are fewer than the normal number of teeth, whereby 6 teeth or fewer teeth are missing (oligodontia refers to the condition of missing more than 6 teeth and the congenital absence of all teeth is called anodontia)." [HPO:curators]
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 HP:0000674 Anodontia "The congenital absence of all teeth." [HPO:curators]
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 HP:0000677 Oligodontia "The condition of missing over 6 teeth (Missing up to 6 teeth is referred to a hypodontia)." [HPO:curators]
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 HP:0000679 Taurodontia 
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 HP:0000684 Delayed dentition "Delayed eruption of teeth." [HPO:curators]
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 HP:0000691 Microdontia 
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 HP:0000698 Conical teeth 
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 HP:0000822 Hypertension "High blood pressure." [HPO:curators]
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 HP:0000830 Hypopituitarism "A condition of reduced function of the pituitary gland characterized by decreased secretion of one or more of the eight pituitary hormones." [HPO:curators]
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 HP:0000958 Dry skin 
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 HP:0000963 Thin skin 
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 HP:0000964 Eczema "Eczema is a form of dermatitis. The term eczema is broadly applied to a range of persistent skin conditions and can be related to a number of underlying conditions. Manifestations of eczema can include dryness and recurring skin rashes with redness, skin edema, itching and dryness, crusting, flaking, blistering, cracking, oozing, or bleeding." [HPO:curators]
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 HP:0000966 Hypohidrosis "Abnormally diminished capacity to sweat." [HPO:curators]
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 HP:0000970 Anhidrosis "Inability to sweat." [HPO:curators]
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 HP:0000977 Soft skin 
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 HP:0001006 Hypotrichosis "Reduced or lacking hair growth." [HPO:curators]
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 HP:0001106 Periorbital hyperpigmentation 
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 HP:0001419 X-linked recessive inheritance "A mode of inheritance that is observed for recessive traits related to a gene encoded on the X chromosome. In the context of medical genetics, X-linked recessive disorders manifest in males (who have one copy of the X chromosome and are thus hemizygotes), but generally not in female heterozygotes who have one mutant and one normal allele." [HPO:curators]
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 HP:0001423 X-linked dominant inheritance "A mode of inheritance that is observed for dominant traits related to a gene encoded on the X chromosome. In the context of medical genetics, X-linked dominant disorders tend to manifest very severely in affected males. The severity of manifestation in females may depend on the degree of skewed X inactivation." [HPO:curators]
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 HP:0001425 Heterogeneous 
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 HP:0001598 Koilonychia 
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 HP:0001609 Hoarse voice 
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 HP:0001618 Dysphonia 
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 HP:0001945 Fever 
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 HP:0002007 Frontal bossing "The presence of an unusually prominent forehead." [HPO:curators]
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 HP:0002046 Intolerance to heat and fever 
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 HP:0002098 Respiratory distress 
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 HP:0002223 Absent eyebrows 
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 HP:0002231 Sparse body hair "Sparseness of the body hair." [HPO:probinson]
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 HP:0002299 Fine, brittle hair 
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 HP:0002557 Hypoplastic nipples 
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 HP:0002561 Absent nipples 
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 HP:0003196 Nasal hypoplasia "Underdevelopment of the `nose` (FMA:46472)." [HPO:probinson]
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0007411 Hypoplastic-absent sebaceous glands 
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 HP:0007592 Hypoplastic-absent eccrine sweat glands 
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 HP:0007607 Hypohidrotic ectodermal dysplasia 
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 HP:0009882 Hypoplasia of the distal phalanges of the hand 
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 HP:0010667 Aplasia of the maxilla "A congenital defect characterized by absence of the `Maxilla` (FMA:9711)." [HPO:probinson]
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 HP:0010803 Everted upper lip vermilion "Inner aspect of the upper lip vermilion (normally apposing the teeth) visible in a frontal view, i.e., the presence of an `everted` (PATO:0001597) `upper lip` (FMA:59817)." [HPO:probinson, pmid:19125428]
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 HP:0011051 Agenesis of premolar "`Agenesis` (MPATH:57) of `premolar tooth` (FMA:55637)." [HPO:ibailleulforestier]
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 HP:0011054 Agenesis of molar "`Agenesis` (MPATH:57) of `molar tooth` (FMA:55638)." [HPO:ibailleulforestier]
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 HP:0011830 Abnormality of oral mucosa "Abnormality of the `oral mucosa` (FMA:59660)." [HPO:probinson]
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 HP:0012471 Thick vermilion border "Increased width of the "skin of vermilion border region of upper lip" (FMA:312645)." [HPO:probinson]
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 HP:0100651 Diabetes mellitus Type I 
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 HP:0100840 Aplasia/Hypoplasia of the eyebrow "Absence or underdevelopment of the eyebrow." [HPO:probinson]
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 HP:0200153 Agenesis of lateral incisor 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000131080 EDA2R / Q9HAV5 / ectodysplasin A2 receptor  / reaction / complex
 ENSG00000135960 EDAR / Q9UNE0 / ectodysplasin A receptor  / reaction / complex
 ENSG00000186197 Q8WWZ3 / EDARADD / EDAR associated death domain  / reaction / complex






 

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