ENSG00000159363


Homo sapiens

Features
Gene ID: ENSG00000159363
  
Biological name :ATP13A2
  
Synonyms : ATP13A2 / ATPase 13A2 / Q9NQ11
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: p36.13
Gene start: 16985958
Gene end: 17011928
  
Corresponding Affymetrix probe sets: 218608_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000427241
Ensembl peptide - ENSP00000424393
Ensembl peptide - ENSP00000478781
Ensembl peptide - ENSP00000327214
Ensembl peptide - ENSP00000341115
Ensembl peptide - ENSP00000413307
Ensembl peptide - ENSP00000421126
Ensembl peptide - ENSP00000422227
Ensembl peptide - ENSP00000422668
Ensembl peptide - ENSP00000423065
Ensembl peptide - ENSP00000424313
NCBI entrez gene - 23400     See in Manteia.
OMIM - 610513
RefSeq - XM_017000850
RefSeq - XM_005245812
RefSeq - XM_005245815
RefSeq - XM_006710512
RefSeq - XM_006710513
RefSeq - XM_011541128
RefSeq - XM_011541129
RefSeq - XM_017000844
RefSeq - XM_017000845
RefSeq - XM_017000846
RefSeq - XM_017000847
RefSeq - XM_017000848
RefSeq - XM_017000849
RefSeq - NM_001141973
RefSeq - NM_001141974
RefSeq - NM_022089
RefSeq - XM_005245810
RefSeq - XM_005245811
RefSeq Peptide - NP_071372
RefSeq Peptide - NP_001135445
RefSeq Peptide - NP_001135446
swissprot - H0Y953
swissprot - H0Y9K0
swissprot - H0Y9K4
swissprot - H0Y8I1
swissprot - Q9NQ11
swissprot - A0A087WUM9
swissprot - H0YAI7
swissprot - H0Y8V5
swissprot - H0Y8Z6
Ensembl - ENSG00000159363
  
Related genetic diseases (OMIM): 606693 - Kufor-Rakeb syndrome, 606693
  617225 - Spastic paraplegia 78, autosomal recessive, 617225
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 atp13a2ENSDARG00000061890Danio rerio
 ATP13A2ENSGALG00000003774Gallus gallus
 Q9CTG6ENSMUSG00000036622Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9H7F0 / ATP13A3 / ATPase 13A3ENSG0000013365740
Q4VNC0 / ATP13A5 / ATPase 13A5ENSG0000018752739
Q4VNC1 / ATP13A4 / ATPase 13A4ENSG0000012724939


Protein motifs (from Interpro)
Interpro ID Name
 IPR001757  P-type ATPase
 IPR006544  P-type ATPase, subfamily V
 IPR008250  P-type ATPase, A domain superfamily
 IPR018303  P-type ATPase, phosphorylation site
 IPR023214  HAD superfamily
 IPR023298  P-type ATPase, transmembrane domain superfamily
 IPR023299  P-type ATPase, cytoplasmic domain N
 IPR036412  HAD-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006812 cation transport IEA
 biological_processGO:0006874 cellular calcium ion homeostasis IDA
 biological_processGO:0006879 cellular iron ion homeostasis IMP
 biological_processGO:0006882 cellular zinc ion homeostasis IMP
 biological_processGO:0010821 regulation of mitochondrion organization IMP
 biological_processGO:0016241 regulation of macroautophagy TAS
 biological_processGO:0016243 regulation of autophagosome size IDA
 biological_processGO:0030003 cellular cation homeostasis TAS
 biological_processGO:0033157 regulation of intracellular protein transport NAS
 biological_processGO:0034220 ion transmembrane transport TAS
 biological_processGO:0034599 cellular response to oxidative stress TAS
 biological_processGO:0046777 protein autophosphorylation TAS
 biological_processGO:0050714 positive regulation of protein secretion IMP
 biological_processGO:0052548 regulation of endopeptidase activity IMP
 biological_processGO:0055069 zinc ion homeostasis IMP
 biological_processGO:0070588 calcium ion transmembrane transport IEA
 biological_processGO:0071287 cellular response to manganese ion TAS
 biological_processGO:0071294 cellular response to zinc ion TAS
 biological_processGO:0097734 extracellular exosome biogenesis IMP
 biological_processGO:0099132 ATP hydrolysis coupled cation transmembrane transport IEA
 biological_processGO:1901215 negative regulation of neuron death TAS
 biological_processGO:1902047 polyamine transmembrane transport IDA
 biological_processGO:1903146 regulation of autophagy of mitochondrion TAS
 biological_processGO:1903543 positive regulation of exosomal secretion IMP
 biological_processGO:1904714 regulation of chaperone-mediated autophagy TAS
 biological_processGO:1905037 autophagosome organization IDA
 biological_processGO:1905123 regulation of glucosylceramidase activity IEA
 biological_processGO:1905165 regulation of lysosomal protein catabolic process IMP
 biological_processGO:1905166 negative regulation of lysosomal protein catabolic process TAS
 biological_processGO:1990938 peptidyl-aspartic acid autophosphorylation IMP
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005765 lysosomal membrane TAS
 cellular_componentGO:0005770 late endosome IDA
 cellular_componentGO:0005771 multivesicular body TAS
 cellular_componentGO:0005776 autophagosome IDA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0012506 vesicle membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030133 transport vesicle IDA
 cellular_componentGO:0031982 vesicle IDA
 cellular_componentGO:0032585 multivesicular body membrane NAS
 cellular_componentGO:0043005 neuron projection IDA
 cellular_componentGO:0043025 neuronal cell body IDA
 cellular_componentGO:0043202 lysosomal lumen TAS
 cellular_componentGO:1905103 integral component of lysosomal membrane IDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005388 calcium-transporting ATPase activity IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008270 zinc ion binding ISS
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0019829 cation-transporting ATPase activity TAS
 molecular_functionGO:0030145 manganese ion binding ISS
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0070300 phosphatidic acid binding IDA
 molecular_functionGO:0080025 phosphatidylinositol-3,5-bisphosphate binding IDA
 molecular_functionGO:1903135 cupric ion binding ISS


Pathways (from Reactome)
Pathway description
Ion transport by P-type ATPases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000020 Urinary incontinence "Loss of the ability to control the urinary bladder leading to involuntary urination." [HPO:sdoelken]
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 HP:0000183 Difficulty in tongue movements 
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 HP:0000298 Mask-like facies 
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 HP:0000338 Hypomimic face 
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 HP:0000458 Anosmia "An inability to perceive odors. This is a general term describing inability to smell arising in any part of the process of smelling from absorption of odorants into the nasal mucous overlying the olfactory epithelium, diffusion to the cilia, binding to olfactory receptor sites, generation of action potentials in olfactory neurons, and perception of a smell." [HPO:curators]
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 HP:0000473 Torticollis 
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 HP:0000511 Vertical supranuclear gaze palsy 
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 HP:0000514 Slow saccades 
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 HP:0000605 Supranuclear gaze palsy 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000643 Blepharospasm "An involuntary recurrent spasm of both eyelids." [HPO:curators]
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 HP:0000658 Eyelid apraxia 
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 HP:0000718 Aggressive behavior "Aggressive behavior can denote verbal aggression, physical aggression against objects, physical aggression against people, and may also include aggression towards oneself." [HPO:curators]
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 HP:0000725 Psychotic episodes 
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 HP:0000726 Dementia 
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 HP:0000736 Short attention span "Reduced attention span characterized by distractibility and impulsivity but not necessarily satisfying the diagnostic criteria for attention deficit hyperactivity disorder." [HPO:curators]
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 HP:0000738 Hallucinations 
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 HP:0000741 Apathy 
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 HP:0001167 Abnormality of the fingers 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001254 Lethargy 
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001258 Spastic paraplegia 
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001272 Cerebellar atrophy 
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 HP:0001276 Hypertonia 
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 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
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 HP:0001289 Confusion "Lack of clarity and coherence of thought, perception, understanding, or action." [HPO:curators]
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 HP:0001300 Parkinsonism 
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 HP:0001336 Myoclonus "Very brief, involuntary random muscular contractions occurring at rest, in response to sensory stimuli, or accompanying voluntary movements." [HPO:curators]
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 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001760 Abnormality of the feet "An abnormality of the feet (foot deformity) is a disorder of the foot that can either be congenital or acquired. Such deformities can include hammer toe, club foot deformity, flat feet, pes cavus, Congenital vertical talus (rocker bottom foot) & etc." [HPO:curators]
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 HP:0001761 Pes cavus 
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 HP:0001945 Fever 
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 HP:0002015 Dysphagia "Difficulty in swallowing." [HPO:curators]
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 HP:0002063 Rigidity 
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 HP:0002067 Bradykinesia "Bradykinesia literally means slow movement, and is used clinically to denote a slowness in the execution of movement (in contrast to hypokinesia, which is used to refer to slowness in the initiation of movement)." [HPO:curators]
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 HP:0002120 Cerebral cortical atrophy 
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 HP:0002172 Postural instability 
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 HP:0002304 Akinesia 
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 HP:0002355 Difficulty walking 
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 HP:0002367 Visual hallucinations 
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 HP:0002375 Hypokinesia 
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 HP:0002385 Paraparesis 
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 HP:0002425 Anarthria "A defect in the motor ability that enables speech." [HPO:curators]
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 HP:0002510 Spastic tetraplegia "Spastic paralysis affecting all four limbs." [HPO:curators]
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 HP:0002548 Favorable response to levodopa 
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 HP:0002607 Bowel incontinence 
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 HP:0002936 Distal sensory impairment 
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 HP:0003324 Generalized muscle weakness "Generalized weakness or decreased strength of the muscles." [HPO:curators]
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 HP:0003487 Babinski sign "Upturning of the big toe (and sometimes fanning of the other toes) in response to stimulation of the sole of the foot. If the Babinski sign is present it can indicate damage to the corticospinal tract." [HPO:curators]
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 HP:0003678 Rapidly progressive 
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 HP:0004409 Hyposmia "A decreased sensitivity to odorants (that is, a decreased ability to perceive odors)." [HPO:curators]
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 HP:0007083 Hyperreflexia in knees 
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 HP:0007350 Hyperreflexia in upper limbs 
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 HP:0008969 Leg muscle stiffness 
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 HP:0010553 Oculogyric crisis "An acute dystonic reaction with blepharospasm, periorbital twitches, and protracted fixed staring episodes. There may be a maximal upward deviation of the eyes in the sustained fashion. Oculogyric crisis can be triggered by a number of factors including neuroleptic medications." [HPO:curators]
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 HP:0012378 Fatigue "A subjective feeling of tiredness characterized by a lack of energy and motivation." [HPO:probinson]
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 HP:0025403 Stooped posture "A habitual positioning of the body with the head and upper back bent forward." []
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 HP:0031008 Lingual dystonia "Involuntary protrusions, movements, spams and contortions of the tongue." [PMID:24808861]
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 HP:0100660 Dyskinesis "A movement disorder which consists of effects including diminished voluntary movements and the presence of involuntary movements." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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