ENSG00000160349


Homo sapiens

Features
Gene ID: ENSG00000160349
  
Biological name :LCN1
  
Synonyms : LCN1 / lipocalin 1 / P31025
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: 1
Band: q34.3
Gene start: 135521438
Gene end: 135526532
  
Corresponding Affymetrix probe sets: 207930_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000263598
Ensembl peptide - ENSP00000360846
NCBI entrez gene - 3933     See in Manteia.
OMIM - 151675
RefSeq - NM_002297
RefSeq - XM_011518675
RefSeq - NM_001252617
RefSeq - NM_001252618
RefSeq - NM_001252619
RefSeq Peptide - NP_001239546
RefSeq Peptide - NP_001239547
RefSeq Peptide - NP_001239548
RefSeq Peptide - NP_002288
swissprot - P31025
swissprot - A0A024R8D7
Ensembl - ENSG00000160349
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
OBP2B / Q9NPH6 / odorant binding protein 2BENSG0000017110244
OBP2A / Q9NY56 / odorant binding protein 2AENSG0000012213635


Protein motifs (from Interpro)
Interpro ID Name
 IPR000566  Lipocalin/cytosolic fatty-acid binding domain
 IPR002345  Lipocalin
 IPR002450  von Ebner"s gland protein/ Bos/Can allergen
 IPR012674  Calycin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001895 retina homeostasis HEP
 biological_processGO:0006508 proteolysis TAS
 biological_processGO:0010951 negative regulation of endopeptidase activity IEA
 biological_processGO:0015909 long-chain fatty acid transport TAS
 biological_processGO:0050896 response to stimulus IEA
 biological_processGO:0050909 sensory perception of taste IEA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005615 extracellular space IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0004869 cysteine-type endopeptidase inhibitor activity TAS
 molecular_functionGO:0005102 signaling receptor binding IPI
 molecular_functionGO:0008270 zinc ion binding IDA
 molecular_functionGO:0031404 chloride ion binding IDA
 molecular_functionGO:0036094 small molecule binding IEA


Pathways (from Reactome)
Pathway description
Transport of fatty acids


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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