ENSG00000160408


Homo sapiens

Features
Gene ID: ENSG00000160408
  
Biological name :ST6GALNAC6
  
Synonyms : Q969X2 / ST6GALNAC6 / ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: -1
Band: q34.11
Gene start: 127885321
Gene end: 127905408
  
Corresponding Affymetrix probe sets: 222571_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000405326
Ensembl peptide - ENSP00000362239
Ensembl peptide - ENSP00000438109
Ensembl peptide - ENSP00000477575
Ensembl peptide - ENSP00000291839
Ensembl peptide - ENSP00000362234
Ensembl peptide - ENSP00000362235
Ensembl peptide - ENSP00000362237
NCBI entrez gene - 30815     See in Manteia.
OMIM - 610135
RefSeq - XM_017014667
RefSeq - XM_011518610
RefSeq - XM_011518611
RefSeq - XM_017014658
RefSeq - XM_017014659
RefSeq - XM_017014660
RefSeq - XM_017014661
RefSeq - XM_017014662
RefSeq - XM_017014663
RefSeq - XM_017014664
RefSeq - XM_017014665
RefSeq - XM_017014666
RefSeq - NM_001286999
RefSeq - NM_001287000
RefSeq - NM_001287001
RefSeq - NM_001287002
RefSeq - NM_001287003
RefSeq - NM_013443
RefSeq Peptide - NP_001273932
RefSeq Peptide - NP_038471
RefSeq Peptide - NP_001273928
RefSeq Peptide - NP_001273929
RefSeq Peptide - NP_001273930
RefSeq Peptide - NP_001273931
swissprot - Q969X2
swissprot - F6SGE3
swissprot - A0A0S2Z5G9
swissprot - X6RH99
swissprot - A0A024R8C6
Ensembl - ENSG00000160408
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 st6galnac6ENSDARG00000036913Danio rerio
 ENSGALG00000005298Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
AL157935.2ENSG0000025752468
Q9BVH7 / ST6GALNAC5 / ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5ENSG0000011706932
Q8NDV1 / ST6GALNAC3 / ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3ENSG0000018400525
Q9H4F1 / ST6GALNAC4 / ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4ENSG0000013684024
Q96JF0 / ST6GAL2 / ST6 beta-galactoside alpha-2,6-sialyltransferase 2ENSG0000014405717
P15907 / ST6GAL1 / ST6 beta-galactoside alpha-2,6-sialyltransferase 1ENSG0000007384914


Protein motifs (from Interpro)
Interpro ID Name
 IPR001675  Glycosyl transferase family 29
 IPR012163  Sialyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001574 ganglioside biosynthetic process ISS
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0006677 glycosylceramide metabolic process IDA
 biological_processGO:0006687 glycosphingolipid metabolic process IDA
 biological_processGO:0009100 glycoprotein metabolic process IDA
 biological_processGO:0009311 oligosaccharide metabolic process IBA
 biological_processGO:0009312 oligosaccharide biosynthetic process ISS
 biological_processGO:0009988 cell-cell recognition IC
 biological_processGO:0018279 protein N-linked glycosylation via asparagine IBA
 biological_processGO:0097503 sialylation IEA
 cellular_componentGO:0000139 Golgi membrane IBA
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005886 plasma membrane NAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane TAS
 molecular_functionGO:0001665 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity ISS
 molecular_functionGO:0008373 sialyltransferase activity ISS
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA


Pathways (from Reactome)
Pathway description
Sialic acid metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr