ENSG00000160563


Homo sapiens

Features
Gene ID: ENSG00000160563
  
Biological name :MED27
  
Synonyms : MED27 / mediator complex subunit 27 / Q6P2C8
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: -1
Band: q34.13
Gene start: 131860107
Gene end: 132079908
  
Corresponding Affymetrix probe sets: 215371_at (Human Genome U133 Plus 2.0 Array)   221598_s_at (Human Genome U133 Plus 2.0 Array)   51176_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000477136
Ensembl peptide - ENSP00000292035
Ensembl peptide - ENSP00000349530
NCBI entrez gene - 9442     See in Manteia.
OMIM - 605044
RefSeq - XM_017015329
RefSeq - NM_001253881
RefSeq - NM_001253882
RefSeq - NM_004269
RefSeq - XM_005272236
RefSeq Peptide - NP_001240811
RefSeq Peptide - NP_004260
RefSeq Peptide - NP_001240810
swissprot - Q6P2C8
swissprot - A0A024R8B7
Ensembl - ENSG00000160563
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 med27ENSDARG00000009681Danio rerio
 MED27ENSGALG00000003683Gallus gallus
 Med27ENSMUSG00000026799Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR021627  Mediator complex, subunit Med27


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IDA
 biological_processGO:0006367 transcription initiation from RNA polymerase II promoter TAS
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0019827 stem cell population maintenance IEA
 cellular_componentGO:0000151 ubiquitin ligase complex IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005667 transcription factor complex IDA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0016592 mediator complex IEA
 molecular_functionGO:0003713 transcription coactivator activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0061630 ubiquitin protein ligase activity IEA


Pathways (from Reactome)
Pathway description
PPARA activates gene expression
Generic Transcription Pathway
Transcriptional regulation of white adipocyte differentiation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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