ENSG00000162065


Homo sapiens

Features
Gene ID: ENSG00000162065
  
Biological name :TBC1D24
  
Synonyms : Q9ULP9 / TBC1D24 / TBC1 domain family member 24
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: 1
Band: p13.3
Gene start: 2475051
Gene end: 2509560
  
Corresponding Affymetrix probe sets: 227632_at (Human Genome U133 Plus 2.0 Array)   227908_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000486835
Ensembl peptide - ENSP00000494678
Ensembl peptide - ENSP00000494145
Ensembl peptide - ENSP00000293970
Ensembl peptide - ENSP00000454408
Ensembl peptide - ENSP00000455005
Ensembl peptide - ENSP00000457266
Ensembl peptide - ENSP00000457896
Ensembl peptide - ENSP00000486121
NCBI entrez gene - 57465     See in Manteia.
OMIM - 613577
RefSeq - XM_017023495
RefSeq - NM_001199107
RefSeq - NM_020705
RefSeq - XM_017023493
RefSeq - XM_017023494
RefSeq Peptide - NP_001186036
RefSeq Peptide - NP_065756
swissprot - H3BTP5
swissprot - H3BV07
swissprot - Q9ULP9
swissprot - H3BNU1
swissprot - A0A0D9SFR5
Ensembl - ENSG00000162065
  
Related genetic diseases (OMIM): 220500 - DOORS syndrome, 220500
  614617 - Deafness , autosomal recessive 86, 614617
  616044 - Deafness, autosomal dominant 65, 616044
  615338 - Epileptic encephalopathy, early infantile, 16, 615338
  605021 - Myoclonic epilepsy, infantile, familial, 605021
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tbc1d24ENSDARG00000069339Danio rerio
 TBC1D24ENSGALG00000009217Gallus gallus
 Gm43796ENSMUSG00000107169Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
AC093525.2ENSG0000026027260


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR006571  TLDc domain
 IPR035969  Rab-GTPase-TBC domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0031175 neuron projection development IMP
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0030054 cell junction IDA
 cellular_componentGO:0031594 neuromuscular junction ISS
 cellular_componentGO:0043195 terminal bouton ISS
 molecular_functionGO:0005096 GTPase activator activity IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
TBC/RABGAPs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
Show

 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000365 Hearing loss 
Show

 HP:0000718 Aggressive behavior "Aggressive behavior can denote verbal aggression, physical aggression against objects, physical aggression against people, and may also include aggression towards oneself." [HPO:curators]
Show

 HP:0000737 Irritability 
Show

 HP:0001112 Leber optic atrophy 
Show

 HP:0001256 Mental retardation, mild "Mild mental retardation is defined as an intelligence quotient (IQ) in the range of 50-69." [HPO:curators]
Show

 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
Show

 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
Show

 HP:0001268 Mental deterioration 
Show

 HP:0001326 EEG shows generalized and focal spike and wave complexes 
Show

 HP:0001336 Myoclonus "Very brief, involuntary random muscular contractions occurring at rest, in response to sensory stimuli, or accompanying voluntary movements." [HPO:curators]
Show

 HP:0001730 Progressive hearing loss 
Show

 HP:0002121 Absence seizures "Recurrent absence seizures are `generalized seizures` (HP:0002197) that are characterized by a sudden cessation of motor activity and by a blank facial expression with flickering of the eyelids. There is no convulsive muscular activity or loss of postural control." [HPO:probinson]
Show

 HP:0002123 Myoclonic seizures "Myoclonic seizures are sudden, brief losses of consciousness and postural tone not associated with tonic muscular contractions. Myoclonic seizures may involve one body part or the entire body. In the latter case, the myoclonic seizure is accompanied by a violent fall but not by loss of consciousness." [HPO:curators]
Show

 HP:0002373 Febrile seizures "Febrile seizures are convulsions induced by a fever in infants or small children and are generally characterized by loss of consciousness and tonic-clonic movements. Most febrile seizures last a minute or two." [HPO:curators]
Show

 HP:0002376 Developmental regression 
Show

 HP:0002463 Language impairment 
Show

 HP:0003677 Slow progression 
Show

 HP:0007018 Attention deficit hyperactivity disorder "Attention deficit hyperactivity disorder (ADHD) manifests at age 2-3 years or by first grade at the latest. The main symptoms are distractibility, impulsivity, hyperactivity, and often trouble organizing tasks and projects, difficulty going to sleep, and social problems from being aggressive, loud, or impatient." [HPO:curators]
Show

 HP:0007207 Seizures, tonic-clonic, photosensitive 
Show

 HP:0010862 Delayed fine motor development "A type of `motor retardation` characterized by an delay in acquiring the ability to control the fingers and hands." [HPO:probinson]
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr