ENSG00000162585


Homo sapiens

Features
Gene ID: ENSG00000162585
  
Biological name :FAAP20
  
Synonyms : FAAP20 / Fanconi anemia core complex associated protein 20 / Q6NZ36
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: p36.33
Gene start: 2184461
Gene end: 2212720
  
Corresponding Affymetrix probe sets: 1556309_s_at (Human Genome U133 Plus 2.0 Array)   1558544_at (Human Genome U133 Plus 2.0 Array)   1562675_at (Human Genome U133 Plus 2.0 Array)   220579_at (Human Genome U133 Plus 2.0 Array)   228197_at (Human Genome U133 Plus 2.0 Array)   229113_s_at (Human Genome U133 Plus 2.0 Array)   230649_at (Human Genome U133 Plus 2.0 Array)   236498_s_at (Human Genome U133 Plus 2.0 Array)   236499_at (Human Genome U133 Plus 2.0 Array)   236584_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000410740
Ensembl peptide - ENSP00000409721
Ensembl peptide - ENSP00000410450
Ensembl peptide - ENSP00000367804
Ensembl peptide - ENSP00000367808
Ensembl peptide - ENSP00000383709
Ensembl peptide - ENSP00000383710
Ensembl peptide - ENSP00000405430
NCBI entrez gene - 199990     See in Manteia.
OMIM - 615183
RefSeq - XM_017000557
RefSeq - NM_001256945
RefSeq - NM_001256946
RefSeq - NM_001256947
RefSeq - NM_001282671
RefSeq - NM_001282672
RefSeq - NM_001282673
RefSeq - NM_182533
RefSeq - XM_006710421
RefSeq - XM_011540922
RefSeq - XM_017000554
RefSeq Peptide - NP_001243874
RefSeq Peptide - NP_001243875
RefSeq Peptide - NP_001243876
RefSeq Peptide - NP_001269600
RefSeq Peptide - NP_001269601
RefSeq Peptide - NP_001269602
RefSeq Peptide - NP_872339
swissprot - H7C2E6
swissprot - H7C361
swissprot - H7C3A6
swissprot - F6S8H2
swissprot - Q6NZ36
Ensembl - ENSG00000162585
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR031490  FAAP20 ubiquitin-binding zinc-finger
 IPR031491  FAAP20, FANCA interaction domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0019985 translesion synthesis IMP
 biological_processGO:0036297 interstrand cross-link repair IMP
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0016604 nuclear body IDA
 cellular_componentGO:0030054 cell junction IDA
 cellular_componentGO:0043240 Fanconi anaemia nuclear complex IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0031593 polyubiquitin modification-dependent protein binding IDA
 molecular_functionGO:0043130 ubiquitin binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0070530 K63-linked polyubiquitin modification-dependent protein binding IDA
 molecular_functionGO:0140036 ubiquitin-dependent protein binding IDA


Pathways (from Reactome)
Pathway description
Fanconi Anemia Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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