ENSG00000163527


Homo sapiens

Features
Gene ID: ENSG00000163527
  
Biological name :STT3B
  
Synonyms : Q8TCJ2 / STT3B / STT3B, catalytic subunit of the oligosaccharyltransferase complex
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: p23
Gene start: 31532638
Gene end: 31637622
  
Corresponding Affymetrix probe sets: 224700_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000295770
NCBI entrez gene - 201595     See in Manteia.
OMIM - 608605
RefSeq - XM_017005859
RefSeq - NM_178862
RefSeq - XM_017005857
RefSeq - XM_017005858
RefSeq Peptide - NP_849193
swissprot - Q8TCJ2
Ensembl - ENSG00000163527
  
Related genetic diseases (OMIM): 615597 - ?Congenital disorder of glycosylation, type Ix, 615597
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 stt3bENSDARG00000001890Danio rerio
 STT3BENSGALG00000011465Gallus gallus
 Stt3bENSMUSG00000032437Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
STT3A / P46977 / STT3A, catalytic subunit of the oligosaccharyltransferase complexENSG0000013491050


Protein motifs (from Interpro)
Interpro ID Name
 IPR003674  Oligosaccharyl transferase, STT3 subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0006516 glycoprotein catabolic process IMP
 biological_processGO:0006986 response to unfolded protein IMP
 biological_processGO:0018279 protein N-linked glycosylation via asparagine ISS
 biological_processGO:0030433 ubiquitin-dependent ERAD pathway IMP
 biological_processGO:0043686 co-translational protein modification IMP
 biological_processGO:0043687 post-translational protein modification IMP
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0008250 oligosaccharyltransferase complex TAS
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004576 oligosaccharyl transferase activity IEA
 molecular_functionGO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity ISS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
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 HP:0000046 Scrotal hypoplasia 
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 HP:0000054 Micropenis 
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000648 Optic atrophy 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001272 Cerebellar atrophy 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001410 Decreased liver function 
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 HP:0001508 Failure to thrive 
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 HP:0001511 Intrauterine growth retardation 
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 HP:0001873 Thrombocytopenia 
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 HP:0002098 Respiratory distress 
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 HP:0003577 Onset at birth 
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 HP:0003819 Death in childhood 
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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 HP:0012345 Abnormal glycosylation "An anomaly of a `glycosylation` (GO:0070085) process, i.e., a process involved in the covalent attachment of a glycosyl residue to a substrate molecule." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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