ENSG00000163635


Homo sapiens

Features
Gene ID: ENSG00000163635
  
Biological name :ATXN7
  
Synonyms : ataxin 7 / ATXN7 / O15265
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: p14.1
Gene start: 63898399
Gene end: 64003453
  
Corresponding Affymetrix probe sets: 204516_at (Human Genome U133 Plus 2.0 Array)   209964_s_at (Human Genome U133 Plus 2.0 Array)   243259_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000420234
Ensembl peptide - ENSP00000428067
Ensembl peptide - ENSP00000428277
Ensembl peptide - ENSP00000439585
NCBI entrez gene - 6314     See in Manteia.
OMIM - 607640
RefSeq - NM_001128149
RefSeq - NM_001177387
RefSeq Peptide - NP_001121621
RefSeq Peptide - NP_001170858
swissprot - O15265
swissprot - H0YAT6
Ensembl - ENSG00000163635
  
Related genetic diseases (OMIM): 164500 - Spinocerebellar ataxia 7, 164500
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 atxn7ENSDARG00000074804Danio rerio
 ENSGALG00000007302Gallus gallus
 Atxn7ENSMUSG00000021738Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ATXN7 / O15265 / ataxin 7ENSG0000028525894
Q9ULK2 / ATXN7L1 / ataxin 7 like 1ENSG0000014677633
Q5T6C5 / ATXN7L2 / ataxin 7 like 2ENSG0000016265021


Protein motifs (from Interpro)
Interpro ID Name
 IPR013243  SCA7 domain
 IPR030706  Ataxin-7
 IPR035500  Nuclear hormone receptor-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000226 microtubule cytoskeleton organization IMP
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006997 nucleus organization TAS
 biological_processGO:0007601 visual perception TAS
 biological_processGO:0016578 histone deubiquitination IDA
 biological_processGO:0016579 protein deubiquitination TAS
 cellular_componentGO:0005634 nucleus TAS
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0015630 microtubule cytoskeleton IDA
 cellular_componentGO:0016363 nuclear matrix IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity TAS


Pathways (from Reactome)
Pathway description
HATs acetylate histones
Ub-specific processing proteases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000514 Slow saccades 
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 HP:0000529 Progressive visual loss 
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 HP:0000548 Cone-rod dystrophy 
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 HP:0000572 Visual loss 
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 HP:0000580 Pigmentary retinopathy 
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 HP:0000602 Ophthalmoplegia 
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 HP:0000608 Macular degeneration 
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 HP:0000613 Photophobia "Excessive sensitivity to light with the sensation of discomfort or pain in the eyes due to exposure to bright light." [HPO:curators]
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 HP:0000618 Blindness 
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 HP:0000623 Supranuclear ophthalmoplegia 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000648 Optic atrophy 
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 HP:0000709 Psychosis "A condition characterized by changes of personality and thought patterns often accompanied by hallucinations and delusional beliefs." [HPO:curators]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001268 Mental deterioration 
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 HP:0001270 Motor retardation 
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 HP:0001272 Cerebellar atrophy 
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 HP:0001310 Dysmetria 
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 HP:0001319 Neonatal hypotonia "Muscular hypotonia (abnormally low muscle tone) manifesting in the neonatal period." [HPO:curators]
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 HP:0001324 Muscle weakness "Reduced strength of muscles." [HPO:curators]
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 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001508 Failure to thrive 
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 HP:0001635 Congestive heart failure "The presence of an abnormality of cardiac function that is responsible for the failure of the heart to pump blood at a rate that is commensurate with the needs of the tissues or a state in which abnormally elevated filling pressures are required for the heart to do so. Heart failure is frequently related to a defect in myocardial contraction." [HPO:curators]
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 HP:0002015 Dysphagia "Difficulty in swallowing." [HPO:curators]
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 HP:0002059 Cerebral atrophy 
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 HP:0002071 Extrapyramidal signs 
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 HP:0002072 Chorea "Chorea (Greek for dance ) refers to widespread arrhythmic involuntary movements of a forcible, jerky and restless fashion." [HPO:curators]
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 HP:0002073 Progressive cerebellar ataxia 
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 HP:0002075 Dysdiadochokinesis "An inability to perform rapidly alternating movements, such as rhythmically tapping the fingers on the knee, generally related to a cerebellar lesion." [HPO:curators]
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 HP:0002310 Orofacial dyskinesia 
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 HP:0002542 Olivopontocerebellar atrophy 
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 HP:0003474 Sensory impairment 
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 HP:0003487 Babinski sign "Upturning of the big toe (and sometimes fanning of the other toes) in response to stimulation of the sole of the foot. If the Babinski sign is present it can indicate damage to the corticospinal tract." [HPO:curators]
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 HP:0003744 Paternal anticipation bias 
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 HP:0007663 Decreased central vision 
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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 HP:0012047 Hemeralopia "A visual defect characterized by the inability to see as clearly in bright light as in dim light. The word hemeralopia literally means day blindness." [HPO:probinson]
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 HP:0012452 Restless legs "A feeling of uneasiness and restlessness in the legs after going to bed (sometimes causing insomnia)." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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