ENSG00000167515


Homo sapiens

Features
Gene ID: ENSG00000167515
  
Biological name :TRAPPC2L
  
Synonyms : Q9UL33 / trafficking protein particle complex 2 like / TRAPPC2L
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: 1
Band: q24.3
Gene start: 88856220
Gene end: 88862686
  
Corresponding Affymetrix probe sets: 218354_at (Human Genome U133 Plus 2.0 Array)   238627_at (Human Genome U133 Plus 2.0 Array)   238628_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000457684
Ensembl peptide - ENSP00000487584
Ensembl peptide - ENSP00000455892
Ensembl peptide - ENSP00000457728
Ensembl peptide - ENSP00000301021
Ensembl peptide - ENSP00000454927
Ensembl peptide - ENSP00000455100
Ensembl peptide - ENSP00000455235
Ensembl peptide - ENSP00000455273
Ensembl peptide - ENSP00000455392
Ensembl peptide - ENSP00000455447
NCBI entrez gene - 51693     See in Manteia.
OMIM - 610970
RefSeq - NM_001318525
RefSeq - XM_017023270
RefSeq - NM_016209
RefSeq - NM_001318532
RefSeq - NM_001318530
RefSeq - NM_001318529
RefSeq - NM_001318528
RefSeq - NM_001318527
RefSeq - NM_001318524
RefSeq - NM_001318526
RefSeq Peptide - NP_001305458
RefSeq Peptide - NP_001305453
RefSeq Peptide - NP_001305454
RefSeq Peptide - NP_001305455
RefSeq Peptide - NP_001305456
RefSeq Peptide - NP_001305457
RefSeq Peptide - NP_001305459
RefSeq Peptide - NP_001305461
RefSeq Peptide - NP_057293
swissprot - A0A0B4J294
swissprot - H3BUK6
swissprot - H3BQQ8
swissprot - H3BPS1
swissprot - H3BPN3
swissprot - H3BPE0
swissprot - H3BP13
swissprot - A0A0B4J286
swissprot - Q9UL33
Ensembl - ENSG00000167515
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trappc2lENSDARG00000111785Danio rerio
 TRAPPC2LENSGALG00000006250Gallus gallus
 Q9JME7ENSMUSG00000015013Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006722  Trafficking protein particle complex subunit 2
 IPR011012  Longin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0048208 COPII vesicle coating TAS
 biological_processGO:0051259 protein complex oligomerization IDA
 biological_processGO:0065009 regulation of molecular function IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0030008 TRAPP complex IDA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0017112 Rab guanyl-nucleotide exchange factor activity TAS


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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