ENSG00000168014


Homo sapiens

Features
Gene ID: ENSG00000168014
  
Biological name :C2CD3
  
Synonyms : C2 calcium dependent domain containing 3 / C2CD3 / Q4AC94
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: -1
Band: q13.4
Gene start: 74012714
Gene end: 74171210
  
Corresponding Affymetrix probe sets: 1558756_at (Human Genome U133 Plus 2.0 Array)   213199_at (Human Genome U133 Plus 2.0 Array)   231708_at (Human Genome U133 Plus 2.0 Array)   36552_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000445933
Ensembl peptide - ENSP00000439343
Ensembl peptide - ENSP00000441742
Ensembl peptide - ENSP00000323339
Ensembl peptide - ENSP00000334379
Ensembl peptide - ENSP00000388750
Ensembl peptide - ENSP00000404577
NCBI entrez gene - 26005     See in Manteia.
OMIM - 615944
RefSeq - XM_017017514
RefSeq - NM_001286577
RefSeq - NM_015531
RefSeq - XM_011544904
RefSeq - XM_011544905
RefSeq - XM_017017510
RefSeq - XM_017017511
RefSeq - XM_017017512
RefSeq - XM_017017513
RefSeq Peptide - NP_001273506
RefSeq Peptide - NP_056346
swissprot - H7BZB4
swissprot - H7C288
swissprot - H0YFM6
swissprot - F5H0U2
swissprot - Q4AC94
swissprot - H0YG44
Ensembl - ENSG00000168014
  
Related genetic diseases (OMIM): 615948 - ?Orofaciodigital syndrome XIV, 615948
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 c2cd3ENSDARG00000074137Danio rerio
 C2CD3ENSGALG00000017314Gallus gallus
 C2cd3ENSMUSG00000047248Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR035892  C2 domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001701 in utero embryonic development IEA
 biological_processGO:0001947 heart looping IEA
 biological_processGO:0007389 pattern specification process IEA
 biological_processGO:0007420 brain development IEA
 biological_processGO:0008589 regulation of smoothened signaling pathway IEA
 biological_processGO:0016485 protein processing IEA
 biological_processGO:0021915 neural tube development IEA
 biological_processGO:0021997 neural plate axis specification IEA
 biological_processGO:0030030 cell projection organization IEA
 biological_processGO:0030162 regulation of proteolysis IEA
 biological_processGO:0030326 embryonic limb morphogenesis IEA
 biological_processGO:0042733 embryonic digit morphogenesis IEA
 biological_processGO:0060271 cilium assembly IEA
 biological_processGO:0061511 centriole elongation IDA
 biological_processGO:0071539 protein localization to centrosome IEA
 biological_processGO:0097711 ciliary basal body-plasma membrane docking TAS
 biological_processGO:1905515 non-motile cilium assembly IMP
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005813 centrosome IDA
 cellular_componentGO:0005814 centriole IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0034451 centriolar satellite IEA
 cellular_componentGO:0036064 ciliary basal body IEA
 cellular_componentGO:0042995 cell projection IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Anchoring of the basal body to the plasma membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000054 Micropenis 
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 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
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 HP:0000180 Lobulated tongue 
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 HP:0000243 Trigonocephaly 
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000506 Telecanthus "An abnormally increased distance between the medial canthi (angle between eyelids) of the eyelids." [HPO:curators]
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 HP:0000582 Upslanting palpebral fissures 
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 HP:0001344 Absent speech development 
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 HP:0001999 Facial dysmorphism 
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 HP:0002079 Hypoplasia of the corpus callosum "Underdevelopment of the corpus callosum." [HPO:curators]
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 HP:0002419 Molar tooth sign on MRI 
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 HP:0003577 Onset at birth 
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 HP:0008753 Absent/abnormal epiglottis 
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 HP:0010297 Bifid tongue "Tongue with a median apical indentation or fork." [pmid:19125428]
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 HP:0010864 Mental retardation, severe "Moderate mental retardation is defined as an intelligence quotient (IQ) in the range of 20-34." [HPO:probinson]
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 HP:0011069 Increased number of teeth "The presence of a `supernumerary` (PATO:0000470), i.e., extra, `tooth` (FMA:12516) or teeth." [HPO:ibailleulforestier]
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 HP:0011802 Hamartoma of tongue 
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 HP:0100259 Postaxial polydactyly "A form of polydactyly in which the extra digit or digits are localized on the side of the fifth finger or fifth toe." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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