ENSG00000168237


Homo sapiens

Features
Gene ID: ENSG00000168237
  
Biological name :GLYCTK
  
Synonyms : glycerate kinase / GLYCTK / Q8IVS8
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: p21.2
Gene start: 52287089
Gene end: 52293476
  
Corresponding Affymetrix probe sets: 238518_x_at (Human Genome U133 Plus 2.0 Array)   242341_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000389175
Ensembl peptide - ENSP00000419868
Ensembl peptide - ENSP00000419008
Ensembl peptide - ENSP00000418951
Ensembl peptide - ENSP00000417526
Ensembl peptide - ENSP00000417264
Ensembl peptide - ENSP00000301965
NCBI entrez gene - 132158     See in Manteia.
OMIM - 610516
RefSeq - XM_017005730
RefSeq - NM_001144951
RefSeq - NM_145262
RefSeq Peptide - NP_001138423
RefSeq Peptide - NP_660305
swissprot - C9JA32
swissprot - C9J3N5
swissprot - A0A024R302
swissprot - A0A0C4DGA0
swissprot - Q8IVS8
Ensembl - ENSG00000168237
  
Related genetic diseases (OMIM): 220120 - D-glyceric aciduria, 220120
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 glyctkENSDARG00000060120Danio rerio
 GLYCTKENSGALG00000004018Gallus gallus
 GlyctkENSMUSG00000020258Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007835  MOFRL domain
 IPR025286  MOFRL-associated domain
 IPR037035  Glycerate kinase-like, C-terminal domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006468 protein phosphorylation IDA
 biological_processGO:0016310 phosphorylation IEA
 biological_processGO:0061624 fructose catabolic process to hydroxyacetone phosphate and glyceraldehyde-3-phosphate TAS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005794 Golgi apparatus IDA
 cellular_componentGO:0005829 cytosol TAS
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008887 glycerate kinase activity TAS
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Fructose catabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001298 Encephalopathy 
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 HP:0001319 Neonatal hypotonia "Muscular hypotonia (abnormally low muscle tone) manifesting in the neonatal period." [HPO:curators]
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 HP:0001336 Myoclonus "Very brief, involuntary random muscular contractions occurring at rest, in response to sensory stimuli, or accompanying voluntary movements." [HPO:curators]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001508 Failure to thrive 
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 HP:0001510 Growth retardation 
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 HP:0001942 Metabolic acidosis 
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 HP:0002120 Cerebral cortical atrophy 
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 HP:0002179 Opisthotonus 
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 HP:0002510 Spastic tetraplegia "Spastic paralysis affecting all four limbs." [HPO:curators]
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 HP:0002521 Hypsarrhythmia "Hypsarrhythmia is abnormal interictal high amplitude waves and a background of irregular spikes demonstrated by electroencephalography (EEG)." [HPO:curators]
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 HP:0003355 Abnormal urinary amino-acid findings 
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 HP:0003812 Phenotypic variability 
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 HP:0008288 Nonketotic hyperglycinemia 
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 HP:0008936 Muscular hypotonia of the trunk "Muscular hypotonia (abnormally low muscle tone) affecting the musculature of the trunk." [HPO:curators]
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 HP:0012448 Delayed myelination "`Delayed` (PATO:0000502) `myelination` (GO:0042552)." [ORCID:0000-0001-5208-3432]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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