ENSG00000168724


Homo sapiens

Features
Gene ID: ENSG00000168724
  
Biological name :DNAJC21
  
Synonyms : DNAJC21 / DnaJ heat shock protein family (Hsp40) member C21 / Q5F1R6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: 1
Band: p13.2
Gene start: 34929593
Gene end: 34958964
  
Corresponding Affymetrix probe sets: 230893_at (Human Genome U133 Plus 2.0 Array)   234094_x_at (Human Genome U133 Plus 2.0 Array)   235001_at (Human Genome U133 Plus 2.0 Array)   235032_at (Human Genome U133 Plus 2.0 Array)   238335_at (Human Genome U133 Plus 2.0 Array)   238336_s_at (Human Genome U133 Plus 2.0 Array)   238337_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000496545
Ensembl peptide - ENSP00000343728
Ensembl peptide - ENSP00000494173
Ensembl peptide - ENSP00000495883
Ensembl peptide - ENSP00000371451
Ensembl peptide - ENSP00000493850
Ensembl peptide - ENSP00000493883
NCBI entrez gene - 134218     See in Manteia.
OMIM - 617048
RefSeq - XM_011513966
RefSeq - NM_001012339
RefSeq - NM_194283
RefSeq - XM_005248249
RefSeq - XM_005248250
RefSeq - XM_011513965
RefSeq Peptide - NP_001012339
RefSeq Peptide - NP_001335349
RefSeq Peptide - NP_919259
swissprot - Q5F1R6
Ensembl - ENSG00000168724
  
Related genetic diseases (OMIM): 617052 - Bone marrow failure syndrome 3, 617052
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 dnajc21ENSDARG00000105195Danio rerio
 DNAJC21ENSGALG00000003387Gallus gallus
 E9Q8D0ENSMUSG00000044224Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001623  DnaJ domain
 IPR003604  Matrin/U1-C-like, C2H2-type zinc finger
 IPR013087  Zinc finger C2H2-type
 IPR018253  DnaJ domain, conserved site
 IPR022755  Zinc finger, double-stranded RNA binding
 IPR036236  Zinc finger C2H2 superfamily
 IPR036869  Chaperone J-domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006457 protein folding NAS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005840 ribosome NAS
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
Show

 HP:0000556 Retinal dystrophy 
Show

 HP:0000668 Hypodontia "Hypodontia describes a situation when there are fewer than the normal number of teeth, whereby 6 teeth or fewer teeth are missing (oligodontia refers to the condition of missing more than 6 teeth and the congenital absence of all teeth is called anodontia)." [HPO:curators]
Show

 HP:0000670 Carious teeth 
Show

 HP:0000691 Microdontia 
Show

 HP:0000768 Pectus carinatum "A deformity of the chest caused by overgrowth of the ribs and characterized by protrusion of the sternum." [HPO:curators]
Show

 HP:0000938 Osteopenia "Osteopenia refers to a reduction in bone mineral density (BMD) below normal peak BMD but not low enough to be classified as osteoporosis. According to the WHO, osteopenia is characterized by a value of BMD more than 1 standard deviation below the young adult mean, but less than 2 standard deviations below this value." [HPO:curators]
Show

 HP:0000944 Abnormality of the metaphyses 
Show

 HP:0000962 Hyperkeratosis "Hyperkeratosis is thickening of the outer layer of the skin, the stratum corneum, which is composed of large, polyhedral, plate-like envelopes filled with keratin which are the dead cells that have migrated up from the stratum granulosum." [HPO:curators]
Show

 HP:0000964 Eczema "Eczema is a form of dermatitis. The term eczema is broadly applied to a range of persistent skin conditions and can be related to a number of underlying conditions. Manifestations of eczema can include dryness and recurring skin rashes with redness, skin edema, itching and dryness, crusting, flaking, blistering, cracking, oozing, or bleeding." [HPO:curators]
Show

 HP:0001000 Abnormality of skin pigmentation 
Show

 HP:0001249 Mental retardation 
Show

 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
Show

 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
Show

 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
Show

 HP:0001508 Failure to thrive 
Show

 HP:0001511 Intrauterine growth retardation 
Show

 HP:0001738 Exocrine pancreatic insufficiency 
Show

 HP:0001873 Thrombocytopenia 
Show

 HP:0001875 Neutropenia 
Show

 HP:0001876 Pancytopenia 
Show

 HP:0001903 Anemia 
Show

 HP:0001915 Aplastic anemia 
Show

 HP:0002024 Malabsorption 
Show

 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
Show

 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
Show

 HP:0002719 Recurrent infections 
Show

 HP:0002750 Delayed skeletal maturation "A decreased rate of skeletal maturation. Delayed skeletal maturation can be diagnosed on the basis of an estimation of the bone age from radiographs of specific bones in the human body." [HPO:curators]
Show

 HP:0002863 Myelodysplasia 
Show

 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
Show

 HP:0004808 Acute myeloid leukemia "A form of leukemia characterized by overproduction of an early myeloid cell." [HPO:curators]
Show

 HP:0005528 Bone marrow hypoplasia 
Show

 HP:0008064 Ichthyosiform abnormality of the skin 
Show

 HP:0010306 Short thorax "Reduced inferior to superior extent of the thorax." [HPO:curators]
Show

 HP:0011107 Recurrent aphthous stomatitis "Recurrent episodes of ulceration of the oral mucosa." [HPO:probinson]
Show

 HP:0100651 Diabetes mellitus Type I 
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr