ENSG00000169762


Homo sapiens

Features
Gene ID: ENSG00000169762
  
Biological name :TAPT1
  
Synonyms : Q6NXT6 / TAPT1 / transmembrane anterior posterior transformation 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: -1
Band: p15.32
Gene start: 16160505
Gene end: 16227410
  
Corresponding Affymetrix probe sets: 216373_at (Human Genome U133 Plus 2.0 Array)   216507_at (Human Genome U133 Plus 2.0 Array)   226735_at (Human Genome U133 Plus 2.0 Array)   227407_at (Human Genome U133 Plus 2.0 Array)   238798_at (Human Genome U133 Plus 2.0 Array)   242318_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000423359
Ensembl peptide - ENSP00000385347
Ensembl peptide - ENSP00000422652
Ensembl peptide - ENSP00000422752
NCBI entrez gene - 202018     See in Manteia.
OMIM - 612758
RefSeq - XM_017007876
RefSeq - XM_005248140
RefSeq - XM_011513812
RefSeq - XM_011513815
RefSeq - XM_011513816
RefSeq - XM_011513817
RefSeq - NM_153365
RefSeq - XM_005248139
RefSeq Peptide - NP_699196
swissprot - H0Y916
swissprot - H0Y985
swissprot - D6RBK3
swissprot - Q6NXT6
Ensembl - ENSG00000169762
  
Related genetic diseases (OMIM): 616897 - Osteochondrodysplasia, complex lethal, Symoens-Barnes-Gistelinck type, 616897
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 A2BIE7ENSDARG00000061143Danio rerio
 tapt1aENSDARG00000073999Danio rerio
 TAPT1ENSGALG00000014486Gallus gallus
 Tapt1ENSMUSG00000046985Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008010  Tapt1 family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001503 ossification IEA
 biological_processGO:0001701 in utero embryonic development IEA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0009791 post-embryonic development IEA
 biological_processGO:0014032 neural crest cell development ISS
 biological_processGO:0030030 cell projection organization IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0045724 positive regulation of cilium assembly IDA
 biological_processGO:0048706 embryonic skeletal system development IEA
 biological_processGO:0051216 cartilage development IEA
 biological_processGO:0061036 positive regulation of cartilage development ISS
 biological_processGO:1903012 positive regulation of bone development ISS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005813 centrosome IDA
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005929 cilium IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0036064 ciliary basal body IDA
 cellular_componentGO:0042995 cell projection IEA
 molecular_functionGO:0016520 growth hormone-releasing hormone receptor activity TAS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000047 Hypospadias "Displacement of the urethral opening on the ventral (inferior) surface of the penis." [HPO:curators]
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 HP:0000054 Micropenis 
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 HP:0000126 Hydronephrosis 
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 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
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 HP:0000248 Brachycephaly "Brachycephaly refers to a short, wide head, which is often caused by premature closure of both coronal sutures." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000316 Hypertelorism 
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000358 Posteriorly rotated ears "A type of `abnormal location of the ears` (HP:0000357) in which the position of the ears is characterized by posterior rotation (the superior part of the ears is rotated towards the back of the head, and the inferior part of the ears towards the front)." [HPO:probinson]
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000431 Broad nasal bridge "Increased horizontal dimension of the upper, bony part of the nose." [HPO:curators]
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000465 Webbed neck 
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 HP:0000470 Short neck 
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 HP:0000506 Telecanthus "An abnormally increased distance between the medial canthi (angle between eyelids) of the eyelids." [HPO:curators]
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 HP:0000773 Short ribs 
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 HP:0000923 Beaded ribs "The presence of a row of beadlike prominences at the junction of a rib and its cartilag." [HPO:curators]
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 HP:0000926 Platyspondyly 
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 HP:0000938 Osteopenia "Osteopenia refers to a reduction in bone mineral density (BMD) below normal peak BMD but not low enough to be classified as osteoporosis. According to the WHO, osteopenia is characterized by a value of BMD more than 1 standard deviation below the young adult mean, but less than 2 standard deviations below this value." [HPO:curators]
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 HP:0001181 Adducted thumbs 
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 HP:0001195 Single umbilical artery 
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 HP:0001321 Cerebellar hypoplasia 
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 HP:0001371 Contractures 
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 HP:0001511 Intrauterine growth retardation 
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 HP:0001518 Low birth weight 
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 HP:0001541 Ascites 
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 HP:0001561 Polyhydramnios 
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 HP:0001629 Ventricular septal defect "A hole between the two bottom chambers (ventricles) of the heart. The defect is centered around the most superior aspect of the ventricular septum." [HPO:curators]
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 HP:0001639 Hypertrophic cardiomyopathy 
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 HP:0001640 Cardiomegaly 
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 HP:0001789 Hydrops fetalis 
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 HP:0002089 Pulmonary hypoplasia 
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 HP:0002119 Ventriculomegaly 
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 HP:0002202 Pleural effusion "The presence of an excessive amount of fluid in the pleural cavity." [HPO:curators]
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 HP:0002265 Large fleshy ears 
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 HP:0002645 Wormian bones 
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 HP:0003015 Metaphyseal flaring "The presence of splayed (i.e.,flared) metaphyseal segments of the long bones." [HPO:curators]
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 HP:0003097 Short femur "An abnormal shortening of the thigh bones." [HPO:curators]
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 HP:0003196 Nasal hypoplasia "Underdevelopment of the `nose` (FMA:46472)." [HPO:probinson]
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 HP:0003978 Fractured radius 
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 HP:0004331 Decreased skull ossification "A reduction in the magnitude or amount of ossification of the skull." [HPO:curators]
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 HP:0005257 Thoracic hypoplasia 
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 HP:0005855 Multiple prenatal fractures "The presence of bone fractures in the prenatal period that are diagnosed at birth or before." [HPO:curators]
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 HP:0006640 Multiple rib fractures 
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 HP:0009826 Hypoplasia involving bones of the extremities 
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 HP:0011220 Prominent forehead "Forward prominence of the entire forehead, due to protrusion of the frontal bone." [pmid:19125436]
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 HP:0012368 Flat face "Absence of concavity or convexity of the face when viewed in profile." [pmid:19125436]
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 HP:0031107 Decreased fibular diameter "Reduced width of the cross sectional diameter of the fibula." []
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 HP:0100333 Unilateral cleft lip 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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