ENSG00000172006


Homo sapiens

Features
Gene ID: ENSG00000172006
  
Biological name :ZNF554
  
Synonyms : Q86TJ5 / zinc finger protein 554 / ZNF554
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: 1
Band: p13.3
Gene start: 2819874
Gene end: 2835773
  
Corresponding Affymetrix probe sets: 232214_x_at (Human Genome U133 Plus 2.0 Array)   242864_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000321132
Ensembl peptide - ENSP00000464865
Ensembl peptide - ENSP00000467997
NCBI entrez gene - 115196     See in Manteia.
RefSeq - XM_017026234
RefSeq - NM_001102651
RefSeq - XM_011527660
RefSeq Peptide - NP_001096121
swissprot - Q86TJ5
swissprot - K7EQV8
swissprot - K7EIR8
Ensembl - ENSG00000172006
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
O95201 / ZNF205 / zinc finger protein 205ENSG0000012238628
Q5VV52 / ZNF691 / zinc finger protein 691ENSG0000016401124


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR013087  Zinc finger C2H2-type
 IPR036051  KRAB domain superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005730 nucleolus IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr