ENSG00000172053


Homo sapiens

Features
Gene ID: ENSG00000172053
  
Biological name :QARS
  
Synonyms : glutaminyl-tRNA synthetase / P47897 / QARS
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: -1
Band: p21.31
Gene start: 49095932
Gene end: 49105135
  
Corresponding Affymetrix probe sets: 217846_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000488917
Ensembl peptide - ENSP00000415247
Ensembl peptide - ENSP00000488960
Ensembl peptide - ENSP00000490664
Ensembl peptide - ENSP00000489930
Ensembl peptide - ENSP00000489828
Ensembl peptide - ENSP00000489558
Ensembl peptide - ENSP00000489550
Ensembl peptide - ENSP00000489462
Ensembl peptide - ENSP00000489409
Ensembl peptide - ENSP00000489384
Ensembl peptide - ENSP00000489365
Ensembl peptide - ENSP00000489331
Ensembl peptide - ENSP00000489223
Ensembl peptide - ENSP00000489214
Ensembl peptide - ENSP00000489170
Ensembl peptide - ENSP00000489154
Ensembl peptide - ENSP00000489118
Ensembl peptide - ENSP00000489082
Ensembl peptide - ENSP00000489056
Ensembl peptide - ENSP00000489039
Ensembl peptide - ENSP00000489011
Ensembl peptide - ENSP00000307567
Ensembl peptide - ENSP00000389823
Ensembl peptide - ENSP00000390015
Ensembl peptide - ENSP00000392850
Ensembl peptide - ENSP00000396326
NCBI entrez gene - 5859     See in Manteia.
OMIM - 603727
RefSeq - XM_017006965
RefSeq - NM_001272073
RefSeq - NM_005051
RefSeq Peptide - NP_001259002
RefSeq Peptide - NP_005042
swissprot - A0A1B0GTT3
swissprot - A0A0U1RRJ7
swissprot - A0A0U1RRI9
swissprot - A0A0U1RRC8
swissprot - A0A0U1RR79
swissprot - A0A0U1RR66
swissprot - A0A0U1RQX9
swissprot - A0A0U1RQX5
swissprot - A0A0U1RQU2
swissprot - A0A0U1RQT0
swissprot - A0A0U1RQQ5
swissprot - A0A0U1RQM8
swissprot - A0A0U1RQL2
swissprot - A0A0U1RQJ6
swissprot - A0A0U1RQE9
swissprot - F2Z2V6
swissprot - H7C0R3
swissprot - P47897
swissprot - A0A0U1RQC3
swissprot - C9J165
swissprot - A0A1B0GVU9
swissprot - B4DDN1
swissprot - A0A1B0GU21
Ensembl - ENSG00000172053
  
Related genetic diseases (OMIM): 615760 - Microcephaly, progressive, seizures, and cerebral and cerebellar atrophy, 615760
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 qarsENSDARG00000010316Danio rerio
 QARSENSGALG00000029980Gallus gallus
 QarsENSMUSG00000032604Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000924  Glutamyl/glutaminyl-tRNA synthetase
 IPR001412  Aminoacyl-tRNA synthetase, class I, conserved site
 IPR004514  Glutamine-tRNA synthetase
 IPR007638  Glutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain 2
 IPR007639  Glutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain, N-terminal
 IPR011035  Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily
 IPR014729  Rossmann-like alpha/beta/alpha sandwich fold
 IPR020056  Ribosomal protein L25/Gln-tRNA synthetase, N-terminal
 IPR020058  Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain
 IPR020059  Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain
 IPR020061  Glutamine-tRNA ligase, alpha-bundle domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0006418 tRNA aminoacylation for protein translation IEA
 biological_processGO:0006425 glutaminyl-tRNA aminoacylation IDA
 biological_processGO:0006469 negative regulation of protein kinase activity IDA
 biological_processGO:0007420 brain development IMP
 biological_processGO:0032873 negative regulation of stress-activated MAPK cascade IDA
 biological_processGO:0043039 tRNA aminoacylation IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IDA
 biological_processGO:2001234 negative regulation of apoptotic signaling pathway IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005759 mitochondrial matrix TAS
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0017101 aminoacyl-tRNA synthetase multienzyme complex IEA
 cellular_componentGO:0032991 protein-containing complex IMP
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004812 aminoacyl-tRNA ligase activity IEA
 molecular_functionGO:0004819 glutamine-tRNA ligase activity TAS
 molecular_functionGO:0004860 protein kinase inhibitor activity IMP
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016874 ligase activity IEA
 molecular_functionGO:0019901 protein kinase binding IPI


Pathways (from Reactome)
Pathway description
SeMet incorporation into proteins
Cytosolic tRNA aminoacylation
Mitochondrial tRNA aminoacylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
Show

 HP:0000253 Microcephaly, progressive "Progressive microcephaly is diagnosed when the head circumference falls progressively behind age- and gender-dependent norms." [HPO:curators]
Show

 HP:0000286 Epicanthus "An epicanthal fold is a semilunar fold of skin that extends from the upper eyelid across the medial canthal area to the lower eyelid." [HPO:curators]
Show

 HP:0000340 Sloping forehead "A form of the forehead that slopes from top to bottom in an anterior direction." [HPO:curators]
Show

 HP:0000341 Narrow forehead "An abnormally reduced side-to-side width of the forehead." [HPO:curators]
Show

 HP:0000358 Posteriorly rotated ears "A type of `abnormal location of the ears` (HP:0000357) in which the position of the ears is characterized by posterior rotation (the superior part of the ears is rotated towards the back of the head, and the inferior part of the ears towards the front)." [HPO:probinson]
Show

 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
Show

 HP:0000601 Hypotelorism 
Show

 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
Show

 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
Show

 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
Show

 HP:0002059 Cerebral atrophy 
Show

 HP:0002079 Hypoplasia of the corpus callosum "Underdevelopment of the corpus callosum." [HPO:curators]
Show

 HP:0002119 Ventriculomegaly 
Show

 HP:0002133 Status epilepticus 
Show

 HP:0003429 Hypomyelination 
Show

 HP:0003676 Progressive disorder 
Show

 HP:0006855 Cerebellar vermis atrophy 
Show

 HP:0009879 Cortical gyral simplification "An abnormal reduction of the number and complexity of the pattern of gyrations of the cerebral cortex." [HPO:curators]
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr