ENSG00000172139


Homo sapiens

Features
Gene ID: ENSG00000172139
  
Biological name :SLC9C1
  
Synonyms : Q4G0N8 / SLC9C1 / solute carrier family 9 member C1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: -1
Band: q13.2
Gene start: 112140887
Gene end: 112294258
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSP00000420688
Ensembl peptide - ENSP00000306627
Ensembl peptide - ENSP00000417274
Ensembl peptide - ENSP00000418371
NCBI entrez gene - 285335     See in Manteia.
OMIM - 612738
RefSeq - XM_017006250
RefSeq - XM_011512725
RefSeq - XM_017006246
RefSeq - XM_017006247
RefSeq - XM_017006248
RefSeq - XM_017006249
RefSeq - NM_001320531
RefSeq - NM_183061
RefSeq - XM_006713603
RefSeq - XM_011512718
RefSeq - XM_011512719
RefSeq - XM_011512720
RefSeq - XM_011512721
RefSeq - XM_011512724
RefSeq Peptide - NP_001307460
RefSeq Peptide - NP_898884
swissprot - F8WCJ0
swissprot - Q4G0N8
swissprot - C9J3M6
Ensembl - ENSG00000172139
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q6UJY2ENSMUSG00000033210Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q5TAH2 / SLC9C2 / solute carrier family 9 member C2 (putative)ENSG0000016275327


Protein motifs (from Interpro)
Interpro ID Name
 IPR000595  Cyclic nucleotide-binding domain
 IPR005821  Ion transport domain
 IPR006153  Cation/H+ exchanger
 IPR014710  RmlC-like jelly roll fold
 IPR018422  Cation/H+ exchanger, CPA1 family
 IPR018490  Cyclic nucleotide-binding-like
 IPR028483  Sodium/hydrogen exchanger 10


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006812 cation transport IEA
 biological_processGO:0006814 sodium ion transport IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0030317 flagellated sperm motility IEA
 biological_processGO:0051453 regulation of intracellular pH IBA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0071805 potassium ion transmembrane transport IBA
 biological_processGO:0098719 sodium ion import across plasma membrane IBA
 biological_processGO:1902600 proton transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0005929 cilium IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031514 motile cilium IEA
 cellular_componentGO:0042995 cell projection IEA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0015297 antiporter activity IEA
 molecular_functionGO:0015299 solute:proton antiporter activity IEA
 molecular_functionGO:0015385 sodium:proton antiporter activity IBA
 molecular_functionGO:0015386 potassium:proton antiporter activity IBA


Pathways (from Reactome)
Pathway description
Stimuli-sensing channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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