ENSG00000172172


Homo sapiens

Features
Gene ID: ENSG00000172172
  
Biological name :MRPL13
  
Synonyms : mitochondrial ribosomal protein L13 / MRPL13 / Q9BYD1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: -1
Band: q24.12
Gene start: 120380761
Gene end: 120445402
  
Corresponding Affymetrix probe sets: 218049_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000306548
Ensembl peptide - ENSP00000430545
Ensembl peptide - ENSP00000428867
Ensembl peptide - ENSP00000428229
NCBI entrez gene - 28998     See in Manteia.
OMIM - 610200
RefSeq - NM_014078
RefSeq Peptide - NP_054797
swissprot - Q9BYD1
swissprot - H0YAX3
swissprot - E5RFI2
swissprot - E5RJI7
Ensembl - ENSG00000172172
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mrpl13ENSDARG00000056903Danio rerio
 MRPL13ENSGALG00000041863Gallus gallus
 Mrpl13ENSMUSG00000022370Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005822  Ribosomal protein L13
 IPR005823  Ribosomal protein L13, bacterial-type
 IPR023563  Ribosomal protein L13, conserved site
 IPR036899  Ribosomal protein L13 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0070125 mitochondrial translational elongation TAS
 biological_processGO:0070126 mitochondrial translational termination TAS
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005743 mitochondrial inner membrane TAS
 cellular_componentGO:0005761 mitochondrial ribosome IEA
 cellular_componentGO:0005762 mitochondrial large ribosomal subunit NAS
 cellular_componentGO:0005840 ribosome IEA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0003729 mRNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Mitochondrial translation initiation
Mitochondrial translation elongation
Mitochondrial translation termination


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr