ENSG00000173011


Homo sapiens

Features
Gene ID: ENSG00000173011
  
Biological name :TADA2B
  
Synonyms : Q86TJ2 / TADA2B / transcriptional adaptor 2B
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: 1
Band: p16.1
Gene start: 7041899
Gene end: 7057952
  
Corresponding Affymetrix probe sets: 226240_at (Human Genome U133 Plus 2.0 Array)   236248_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000423181
Ensembl peptide - ENSP00000425731
Ensembl peptide - ENSP00000423947
Ensembl peptide - ENSP00000308022
Ensembl peptide - ENSP00000422398
NCBI entrez gene - 93624     See in Manteia.
OMIM - 608790
RefSeq - NM_152293
RefSeq - XM_011513595
RefSeq Peptide - NP_689506
swissprot - D6RJ05
swissprot - D6RC20
swissprot - Q86TJ2
Ensembl - ENSG00000173011
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tada2bENSDARG00000003769Danio rerio
 TADA2BENSGALG00000015547Gallus gallus
 Tada2bENSMUSG00000029196Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TADA2A / transcriptional adaptor 2AENSG0000027623429


Protein motifs (from Interpro)
Interpro ID Name
 IPR000433  Zinc finger, ZZ-type
 IPR001005  SANT/Myb domain
 IPR009057  Homeobox-like domain superfamily
 IPR016827  Transcriptional adaptor 2
 IPR017884  SANT domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006338 chromatin remodeling IBA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0016573 histone acetylation IEA
 biological_processGO:0016579 protein deubiquitination TAS
 biological_processGO:0035065 regulation of histone acetylation IEA
 biological_processGO:0035066 positive regulation of histone acetylation IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0030914 STAGA complex IEA
 cellular_componentGO:0070461 SAGA-type complex IDA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISM
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IBA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0003713 transcription coactivator activity IBA
 molecular_functionGO:0004402 histone acetyltransferase activity IBA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity TAS
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
HATs acetylate histones
Ub-specific processing proteases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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