ENSG00000174227


Homo sapiens

Features
Gene ID: ENSG00000174227
  
Biological name :PIGG
  
Synonyms : phosphatidylinositol glycan anchor biosynthesis class G / PIGG / Q5H8A4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: 1
Band: p16.3
Gene start: 499210
Gene end: 540196
  
Corresponding Affymetrix probe sets: 1563842_at (Human Genome U133 Plus 2.0 Array)   218652_s_at (Human Genome U133 Plus 2.0 Array)   231692_at (Human Genome U133 Plus 2.0 Array)   233654_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000421550
Ensembl peptide - ENSP00000415203
Ensembl peptide - ENSP00000422410
Ensembl peptide - ENSP00000427069
Ensembl peptide - ENSP00000426002
Ensembl peptide - ENSP00000424800
Ensembl peptide - ENSP00000424619
Ensembl peptide - ENSP00000423596
Ensembl peptide - ENSP00000311750
Ensembl peptide - ENSP00000372494
NCBI entrez gene - 54872     See in Manteia.
OMIM - 616918
RefSeq - XM_017008326
RefSeq - NM_001289052
RefSeq - NM_001289053
RefSeq - NM_001289055
RefSeq - NM_001289057
RefSeq - NM_017733
RefSeq - XM_005272284
RefSeq - XM_011513490
RefSeq - XM_011513491
RefSeq - XM_011513493
RefSeq - XM_011513494
RefSeq - XM_017008321
RefSeq - XM_017008322
RefSeq - XM_017008323
RefSeq - XM_017008324
RefSeq - XM_017008325
RefSeq - NM_001127178
RefSeq - NM_001289051
RefSeq Peptide - NP_001275981
RefSeq Peptide - NP_001275982
RefSeq Peptide - NP_001275984
RefSeq Peptide - NP_001275986
RefSeq Peptide - NP_001332915
RefSeq Peptide - NP_060203
RefSeq Peptide - NP_001120650
RefSeq Peptide - NP_001275980
swissprot - E7EM50
swissprot - D6RFE8
swissprot - D6RD39
swissprot - D6RC16
swissprot - D6R9J9
swissprot - E7EWV1
swissprot - Q5H8A4
Ensembl - ENSG00000174227
  
Related genetic diseases (OMIM): 616917 - Mental retardation, autosomal recessive 53, 616917
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch73-49o8.1ENSDARG00000038270Danio rerio
 PIGGENSGALG00000015349Gallus gallus
 PiggENSMUSG00000029263Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002591  Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase
 IPR017849  Alkaline phosphatase-like, alpha/beta/alpha
 IPR017850  Alkaline-phosphatase-like, core domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006506 GPI anchor biosynthetic process IEA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0016254 preassembly of GPI anchor in ER membrane TAS
 cellular_componentGO:0005783 endoplasmic reticulum IDA
 cellular_componentGO:0005789 endoplasmic reticulum membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030176 integral component of endoplasmic reticulum membrane IBA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016780 phosphotransferase activity, for other substituted phosphate groups TAS
 molecular_functionGO:0051267 CP2 mannose-ethanolamine phosphotransferase activity IDA
 molecular_functionGO:0051377 mannose-ethanolamine phosphotransferase activity IEA


Pathways (from Reactome)
Pathway description
Synthesis of glycosylphosphatidylinositol (GPI)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000750 Impaired language development 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001265 Hyporeflexia 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001321 Cerebellar hypoplasia 
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 HP:0001511 Intrauterine growth retardation 
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 HP:0002059 Cerebral atrophy 
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 HP:0002079 Hypoplasia of the corpus callosum "Underdevelopment of the corpus callosum." [HPO:curators]
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 HP:0002187 Mental retardation, profound "Severe mental retardation is defined as an intelligence quotient (IQ) below 20." [HPO:curators]
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 HP:0003577 Onset at birth 
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 HP:0006829 Severe muscular hypotonia "A severe degree of muscular hypotonia characterized by markedly reduced muscle tone." [HPO:curators]
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 HP:0011193 EEG with focal spikes "EEG with focal sharp transient waves of a duration less than 80 msec." [HPO:jalbers]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000151665 PIGF / Q07326 / phosphatidylinositol glycan anchor biosynthesis class F  / complex






 

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