ENSG00000174796


Homo sapiens

Features
Gene ID: ENSG00000174796
  
Biological name :THAP6
  
Synonyms : Q8TBB0 / THAP6 / THAP domain containing 6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: 1
Band: q21.1
Gene start: 75513946
Gene end: 75550473
  
Corresponding Affymetrix probe sets: 227813_at (Human Genome U133 Plus 2.0 Array)   230169_at (Human Genome U133 Plus 2.0 Array)   235218_x_at (Human Genome U133 Plus 2.0 Array)   235653_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000370217
Ensembl peptide - ENSP00000427651
Ensembl peptide - ENSP00000426760
Ensembl peptide - ENSP00000426698
Ensembl peptide - ENSP00000426581
Ensembl peptide - ENSP00000425646
Ensembl peptide - ENSP00000424949
Ensembl peptide - ENSP00000424255
Ensembl peptide - ENSP00000423720
Ensembl peptide - ENSP00000422402
Ensembl peptide - ENSP00000309007
NCBI entrez gene - 152815     See in Manteia.
OMIM - 612535
RefSeq - XM_017007801
RefSeq - NM_001317791
RefSeq - NM_144721
RefSeq - XM_005262772
RefSeq - XM_005262774
RefSeq - XM_006714109
RefSeq - XM_011531666
RefSeq - XM_011531667
RefSeq - XM_017007800
RefSeq Peptide - NP_001304720
RefSeq Peptide - NP_653322
swissprot - D6REQ5
swissprot - D6REL7
swissprot - D6RC19
swissprot - D6RBC3
swissprot - A0A024RDF9
swissprot - D6RFK7
swissprot - D6RJG2
swissprot - Q8TBB0
swissprot - D6RF27
Ensembl - ENSG00000174796
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CU655961.1ENSDARG00000055690Danio rerio
 si:ch73-130a3.4ENSDARG00000056213Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
THAP9 / Q9H5L6 / THAP domain containing 9ENSG0000016815230


Protein motifs (from Interpro)
Interpro ID Name
 IPR006612  THAP-type zinc finger


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0015630 microtubule cytoskeleton IDA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISM
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr