ENSG00000177181


Homo sapiens

Features
Gene ID: ENSG00000177181
  
Biological name :RIMKLA
  
Synonyms : Q8IXN7 / ribosomal modification protein rimK like family member A / RIMKLA
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: p34.2
Gene start: 42380795
Gene end: 42422578
  
Corresponding Affymetrix probe sets: 235948_at (Human Genome U133 Plus 2.0 Array)   236376_at (Human Genome U133 Plus 2.0 Array)   236884_at (Human Genome U133 Plus 2.0 Array)   241075_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000387064
Ensembl peptide - ENSP00000414330
NCBI entrez gene - 284716     See in Manteia.
RefSeq - XM_017001082
RefSeq - NM_173642
RefSeq - XM_006710585
RefSeq Peptide - NP_775913
swissprot - X1WI25
swissprot - Q8IXN7
Ensembl - ENSG00000177181
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q66HZ2ENSDARG00000016830Danio rerio
 Q6PFX8ENSMUSG00000048899Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9ULI2 / RIMKLB / ribosomal modification protein rimK like family member BENSG0000016653266


Protein motifs (from Interpro)
Interpro ID Name
 IPR004666  Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX
 IPR011761  ATP-grasp fold
 IPR013651  ATP-grasp fold, RimK-type
 IPR013815  ATP-grasp fold, subdomain 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006464 cellular protein modification process IEA
 biological_processGO:0008652 cellular amino acid biosynthetic process TAS
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005829 cytosol TAS
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016874 ligase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0072590 N-acetyl-L-aspartate-L-glutamate ligase activity TAS


Pathways (from Reactome)
Pathway description
Amino acid synthesis and interconversion (transamination)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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