ENSG00000178163


Homo sapiens

Features
Gene ID: ENSG00000178163
  
Biological name :ZNF518B
  
Synonyms : Q9C0D4 / zinc finger protein 518B / ZNF518B
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: -1
Band: p16.1
Gene start: 10439874
Gene end: 10457410
  
Corresponding Affymetrix probe sets: 226909_at (Human Genome U133 Plus 2.0 Array)   230715_at (Human Genome U133 Plus 2.0 Array)   241580_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000425298
Ensembl peptide - ENSP00000317614
NCBI entrez gene - 85460     See in Manteia.
OMIM - 617734
RefSeq - XM_017008786
RefSeq - NM_053042
RefSeq - XM_005248193
RefSeq - XM_017008784
RefSeq - XM_017008785
RefSeq Peptide - NP_444270
swissprot - Q9C0D4
swissprot - D6RDM9
Ensembl - ENSG00000178163
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ZNF518BENSGALG00000014954Gallus gallus
 Zfp518bENSMUSG00000046572Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6AHZ1 / ZNF518A / zinc finger protein 518AENSG0000017785321


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type
 IPR027760  Zinc finger protein 518
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr