ENSG00000178338


Homo sapiens

Features
Gene ID: ENSG00000178338
  
Biological name :ZNF354B
  
Synonyms : Q96LW1 / zinc finger protein 354B / ZNF354B
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: 1
Band: q35.3
Gene start: 178859953
Gene end: 178888122
  
Corresponding Affymetrix probe sets: 1553612_at (Human Genome U133 Plus 2.0 Array)   230168_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000429827
Ensembl peptide - ENSP00000327143
NCBI entrez gene - 117608     See in Manteia.
RefSeq - NM_058230
RefSeq Peptide - NP_478137
swissprot - Q96LW1
swissprot - E5RH89
Ensembl - ENSG00000178338
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q9QXT9ENSMUSG00000020335Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
O60765 / ZNF354A / zinc finger protein 354AENSG0000016913185
ZFP90 / Q8TF47 / ZFP90 zinc finger proteinENSG0000018493945
Q5JNZ3 / ZNF311 / zinc finger protein 311ENSG0000019793533


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036051  KRAB domain superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr