ENSG00000184967


Homo sapiens

Features
Gene ID: ENSG00000184967
  
Biological name :NOC4L
  
Synonyms : NOC4L / nucleolar complex associated 4 homolog / Q9BVI4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: 1
Band: q24.33
Gene start: 132144448
Gene end: 132152473
  
Corresponding Affymetrix probe sets: 218860_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000328854
Ensembl peptide - ENSP00000438255
NCBI entrez gene - 79050     See in Manteia.
OMIM - 612819
RefSeq - XM_017019960
RefSeq - NM_024078
RefSeq Peptide - NP_076983
swissprot - Q9BVI4
swissprot - F5H303
Ensembl - ENSG00000184967
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 noc4lENSDARG00000045565Danio rerio
 NOC4LENSGALG00000002272Gallus gallus
 Noc4lENSMUSG00000033294Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005612  CCAAT-binding factor
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR027193  Nucleolar complex protein 4


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006364 rRNA processing TAS
 biological_processGO:0042254 ribosome biogenesis IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005730 nucleolus IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030692 Noc4p-Nop14p complex IBA
 cellular_componentGO:0031965 nuclear membrane IEA
 cellular_componentGO:0032040 small-subunit processome IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISM
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005488 binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
rRNA modification in the nucleus and cytosol
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr