ENSG00000187609


Homo sapiens

Features
Gene ID: ENSG00000187609
  
Biological name :EXD3
  
Synonyms : EXD3 / exonuclease 3-5 domain containing 3 / Q8N9H8
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: -1
Band: q34.3
Gene start: 137306896
Gene end: 137423262
  
Corresponding Affymetrix probe sets: 1555914_a_at (Human Genome U133 Plus 2.0 Array)   220838_at (Human Genome U133 Plus 2.0 Array)   241363_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000435830
Ensembl peptide - ENSP00000431859
Ensembl peptide - ENSP00000436717
Ensembl peptide - ENSP00000432895
Ensembl peptide - ENSP00000433010
Ensembl peptide - ENSP00000340474
NCBI entrez gene - 54932     See in Manteia.
RefSeq - XM_017014867
RefSeq - XM_011518810
RefSeq - XM_011518814
RefSeq - XM_017014861
RefSeq - XM_017014862
RefSeq - XM_017014863
RefSeq - XM_017014864
RefSeq - XM_017014865
RefSeq - XM_017014866
RefSeq - NM_001286823
RefSeq - NM_017820
RefSeq Peptide - NP_001273752
RefSeq Peptide - NP_060290
swissprot - E9PI94
swissprot - H0YD51
swissprot - E9PSB6
swissprot - A0A140VJP9
swissprot - Q8N9H8
swissprot - E9PN82
Ensembl - ENSG00000187609
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 exd3ENSDARG00000063140Danio rerio
 ENSGALG00000008959Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002562  3"-5" exonuclease domain
 IPR002782  Mut7-C RNAse domain
 IPR012337  Ribonuclease H-like superfamily
 IPR036397  Ribonuclease H superfamily
 IPR037432  Exonuclease Mut-7, DEDDy 3"-5" exonuclease domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006139 nucleobase-containing compound metabolic process IEA
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0004518 nuclease activity IEA
 molecular_functionGO:0004527 exonuclease activity IEA
 molecular_functionGO:0008408 3"-5" exonuclease activity IBA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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