ENSG00000188352


Homo sapiens

Features
Gene ID: ENSG00000188352
  
Biological name :FOCAD
  
Synonyms : FOCAD / focadhesin / Q5VW36
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: 1
Band: p21.3
Gene start: 20658309
Gene end: 20995955
  
Corresponding Affymetrix probe sets: 218503_at (Human Genome U133 Plus 2.0 Array)   232875_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000475075
Ensembl peptide - ENSP00000474915
Ensembl peptide - ENSP00000475030
Ensembl peptide - ENSP00000344307
Ensembl peptide - ENSP00000369599
Ensembl peptide - ENSP00000474563
Ensembl peptide - ENSP00000474683
NCBI entrez gene - 54914     See in Manteia.
OMIM - 614606
RefSeq - XM_017014859
RefSeq - NM_017794
RefSeq - XM_017014852
RefSeq - XM_017014853
RefSeq - XM_017014854
RefSeq - XM_017014855
RefSeq - XM_017014856
RefSeq - XM_017014857
RefSeq - XM_017014858
RefSeq - XM_005251494
RefSeq - XM_011517945
RefSeq Peptide - NP_060264
swissprot - S4R3N8
swissprot - S4R3S9
swissprot - Q5VW36
swissprot - S4R437
swissprot - S4R450
swissprot - S4R400
Ensembl - ENSG00000188352
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 focadENSDARG00000022020Danio rerio
 FOCADENSGALG00000015071Gallus gallus
 FocadENSMUSG00000038368Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR021392  Focadhesin
 IPR022542  Domain of unknown function DUF3730


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005925 focal adhesion IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0005488 binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr