ENSG00000189171


Homo sapiens

Features
Gene ID: ENSG00000189171
  
Biological name :S100A13
  
Synonyms : Q99584 / S100A13 / S100 calcium binding protein A13
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: q21.3
Gene start: 153618787
Gene end: 153631360
  
Corresponding Affymetrix probe sets: 202598_at (Human Genome U133 Plus 2.0 Array)   213481_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000344822
Ensembl peptide - ENSP00000376398
Ensembl peptide - ENSP00000376399
Ensembl peptide - ENSP00000392767
NCBI entrez gene - 6284     See in Manteia.
OMIM - 601989
RefSeq - XM_017002036
RefSeq - NM_001024210
RefSeq - NM_001024211
RefSeq - NM_001024212
RefSeq - NM_001024213
RefSeq - NM_005979
RefSeq - XM_005245434
RefSeq - XM_011509862
RefSeq - XM_011509863
RefSeq - XM_011509864
RefSeq - XM_017002034
RefSeq - XM_017002035
RefSeq Peptide - NP_001019382
RefSeq Peptide - NP_001019383
RefSeq Peptide - NP_001019384
RefSeq Peptide - NP_005970
RefSeq Peptide - NP_001019381
swissprot - Q99584
Ensembl - ENSG00000189171
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 s100a11ENSDARG00000093628Danio rerio
 S100A13ENSGALG00000046614Gallus gallus
 S100a13ENSMUSG00000042312Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9HCY8 / S100A14 / S100 calcium binding protein A14ENSG0000018933438


Protein motifs (from Interpro)
Interpro ID Name
 IPR011992  EF-hand domain pair
 IPR013787  S100/CaBP-9k-type, calcium binding, subdomain
 IPR028487  Protein S100-A13


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008284 positive regulation of cell proliferation IEA
 biological_processGO:0008360 regulation of cell shape IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0043123 positive regulation of I-kappaB kinase/NF-kappaB signaling IDA
 biological_processGO:0043303 mast cell degranulation NAS
 biological_processGO:0046688 response to copper ion IEA
 biological_processGO:0050663 cytokine secretion IMP
 biological_processGO:0050703 interleukin-1 alpha secretion IDA
 biological_processGO:0051602 response to electrical stimulus IEA
 cellular_componentGO:0005576 extracellular region IDA
 cellular_componentGO:0005615 extracellular space IDA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0042629 mast cell granule IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005507 copper ion binding IDA
 molecular_functionGO:0005509 calcium ion binding IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008270 zinc ion binding IDA
 molecular_functionGO:0008289 lipid binding IEA
 molecular_functionGO:0017134 fibroblast growth factor binding IPI
 molecular_functionGO:0042803 protein homodimerization activity IPI
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0050786 RAGE receptor binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr