ENSG00000198168


Homo sapiens

Features
Gene ID: ENSG00000198168
  
Biological name :SVIP
  
Synonyms : Q8NHG7 / small VCP interacting protein / SVIP
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: -1
Band: p14.3
Gene start: 22813799
Gene end: 22830299
  
Corresponding Affymetrix probe sets: 226278_at (Human Genome U133 Plus 2.0 Array)   230005_at (Human Genome U133 Plus 2.0 Array)   230006_s_at (Human Genome U133 Plus 2.0 Array)   230285_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000346130
NCBI entrez gene - 258010     See in Manteia.
RefSeq - NM_001320342
RefSeq - NM_148893
RefSeq - NM_001320341
RefSeq Peptide - NP_001307270
RefSeq Peptide - NP_001307271
RefSeq Peptide - NP_683691
swissprot - Q8NHG7
Ensembl - ENSG00000198168
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch73-147o17.1ENSDARG00000097236Danio rerio
 SVIPENSGALG00000003648Gallus gallus
 SvipENSMUSG00000074093Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR031632  Small VCP/p97-interacting protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010508 positive regulation of autophagy IMP
 biological_processGO:0031333 negative regulation of protein complex assembly IMP
 biological_processGO:0043312 neutrophil degranulation TAS
 biological_processGO:1903061 positive regulation of protein lipidation IMP
 biological_processGO:1903070 negative regulation of ER-associated ubiquitin-dependent protein catabolic process IMP
 biological_processGO:1904153 negative regulation of retrograde protein transport, ER to cytosol IMP
 biological_processGO:1904240 negative regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IDA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030667 secretory granule membrane TAS
 cellular_componentGO:0030868 smooth endoplasmic reticulum membrane IEA
 cellular_componentGO:0031225 anchored component of membrane IDA
 cellular_componentGO:0036513 Derlin-1 retrotranslocation complex IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 cellular_componentGO:0070821 tertiary granule membrane TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0043621 protein self-association IMP
 molecular_functionGO:0051117 ATPase binding IPI


Pathways (from Reactome)
Pathway description
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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