ENSG00000198246


Homo sapiens

Features
Gene ID: ENSG00000198246
  
Biological name :SLC29A3
  
Synonyms : Q9BZD2 / SLC29A3 / solute carrier family 29 member 3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 10
Strand: 1
Band: q22.1
Gene start: 71319258
Gene end: 71381423
  
Corresponding Affymetrix probe sets: 219344_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000496664
Ensembl peptide - ENSP00000496674
Ensembl peptide - ENSP00000362285
Ensembl peptide - ENSP00000493872
Ensembl peptide - ENSP00000493995
Ensembl peptide - ENSP00000494066
Ensembl peptide - ENSP00000494378
Ensembl peptide - ENSP00000494827
Ensembl peptide - ENSP00000495000
Ensembl peptide - ENSP00000495041
Ensembl peptide - ENSP00000495077
Ensembl peptide - ENSP00000495859
Ensembl peptide - ENSP00000495980
NCBI entrez gene - 55315     See in Manteia.
OMIM - 612373
RefSeq - NM_001174098
RefSeq - NM_018344
RefSeq - XM_017016378
RefSeq - XM_006717910
RefSeq - XM_017016377
RefSeq Peptide - NP_001167569
RefSeq Peptide - NP_060814
swissprot - Q9BZD2
Ensembl - ENSG00000198246
  
Related genetic diseases (OMIM): 602782 - Histiocytosis-lymphadenopathy plus syndrome, 602782
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc29a3ENSDARG00000077828Danio rerio
 Q99P65ENSMUSG00000020100Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q99808 / SLC29A1 / solute carrier family 29 member 1 (Augustine blood group)ENSG0000011275931
Q14542 / SLC29A2 / solute carrier family 29 member 2ENSG0000017466929
Q7RTT9 / SLC29A4 / solute carrier family 29 member 4ENSG0000016463824


Protein motifs (from Interpro)
Interpro ID Name
 IPR002259  Equilibrative nucleoside transporter
 IPR030193  Equilibrative nucleoside transporter 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015858 nucleoside transport IEA
 biological_processGO:1901642 nucleoside transmembrane transport IEA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005765 lysosomal membrane IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005794 Golgi apparatus IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031902 late endosome membrane IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 molecular_functionGO:0005337 nucleoside transmembrane transporter activity IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Defective SLC29A3 causes histiocytosis-lymphadenopathy plus syndrome (HLAS)
Transport of nucleosides and free purine and pyrimidine bases across the plasma membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000027 Azoospermia 
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 HP:0000054 Micropenis 
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 HP:0000105 Enlarged kidneys 
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 HP:0000135 Hypogonadism "Reduced function of the gonads (testes in males or ovaries in females)." [HPO:curators]
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 HP:0000141 Amenorrhea 
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 HP:0000204 Cleft lip "A gap in the `upper lip` (FMA:59817). This is a congenital defect resulting from nonfusion of tissues of the lip during embryonal development." [HPO:probinson]
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 HP:0000212 Gingival hyperplasia 
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 HP:0000238 Hydrocephalus 
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 HP:0000256 Macrocephaly "The presence of an abnormally large `skull` (FMA:46565)." [HPO:probinson]
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 HP:0000293 Full cheeks 
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 HP:0000316 Hypertelorism 
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 HP:0000365 Hearing loss 
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000520 Proptosis 
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 HP:0000534 Abnormality of the eyebrow "An abnormality of the `eyebrow` (FMA:54237)." [HPO:probinson]
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000648 Optic atrophy 
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 HP:0000682 Abnormality of dental enamel "An abnormality of the dental enamel, which is the external layer of the teeth, being a highly mineralized substance consisting primarily of hydroxylapatite." [HPO:curators]
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 HP:0000684 Delayed dentition "Delayed eruption of teeth." [HPO:curators]
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 HP:0000771 Gynecomastia 
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 HP:0000815 Hypergonadotropic hypogonadism "Reduced function of the gonads (testes in males or ovaries in females) associated with excess pituitary gonadotropin secretion and resulting in delayed sexual development and growth delay." [HPO:curators]
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 HP:0000819 Diabetes mellitus 
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 HP:0000823 Delayed puberty 
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 HP:0000824 Growth hormone deficiency "Insufficient production of growth hormone, which is produced by the anterior pituitary gland." [HPO:curators]
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 HP:0000926 Platyspondyly 
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 HP:0000944 Abnormality of the metaphyses 
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 HP:0000953 Hyperpigmentation 
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 HP:0000998 Hypertrichosis "Hypertrichosis is increased hair growth that is abnormal in quantity or location." [HPO:curators]
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 HP:0001084 Corneal arcus "A hazy, grayish-white ring about 2 mm in width located close to but separated from the limbus (the corneoscleral junction). Corneal arcus generally occurs bilaterally, and is related to lipid deposition in the cornea. Corneal arcus can occur in elderly persons as a part of the aging process but may be associated with hypercholesterolemia in people under the age of 50 years." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001256 Mental retardation, mild "Mild mental retardation is defined as an intelligence quotient (IQ) in the range of 50-69." [HPO:curators]
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 HP:0001291 Abnormality of the cranial nerves "Abnormality affecting one or more of the cranial nerves, which emerge directly from the brain stem." [HPO:curators.]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001433 Hepatosplenomegaly 
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 HP:0001596 Alopecia "Loss of hair from the head or body." [HPO:curators]
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 HP:0001629 Ventricular septal defect "A hole between the two bottom chambers (ventricles) of the heart. The defect is centered around the most superior aspect of the ventricular septum." [HPO:curators]
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 HP:0001631 Atrial septal defect "Atrial septal defect (ASD) is a congenital heart defect that enables blood flow between the left and right atria via the interatrial septum. The three common types of ASD are sinus venosus defects, ostium secundum defects, and ostium primum defects." [HPO:curators]
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 HP:0001634 Mitral valve prolapse 
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 HP:0001640 Cardiomegaly 
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 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
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 HP:0001763 Pes planus "A condition in which the arch of the foot is flat, with the entire sole of the foot being in near-complete contact with the ground." [HPO:curators]
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 HP:0001822 Hallux valgus "Lateral deviation of the great toe (i.e., in the direction of the little toe)." [HPO:curators]
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 HP:0001935 Microcytic anemia 
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 HP:0001945 Fever 
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 HP:0001954 Fever, episodic "Periodic (episodic or recurrent) bouts of fever that do not have an infectious cause." [HPO:curators]
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 HP:0002024 Malabsorption 
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 HP:0002110 Bronchiectasis 
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 HP:0002155 Hypertriglyceridemia 
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002257 Chronic rhinitis 
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 HP:0002376 Developmental regression 
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 HP:0002514 Cerebral calcification "The presence of calcification within brain structures." [HPO:curators]
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 HP:0002594 Pancreatic hypoplasia 
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 HP:0002619 Varicose veins 
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 HP:0002716 Lymphadenopathy 
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 HP:0002750 Delayed skeletal maturation "A decreased rate of skeletal maturation. Delayed skeletal maturation can be diagnosed on the basis of an estimation of the bone age from radiographs of specific bones in the human body." [HPO:curators]
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 HP:0002757 Recurrent fractures "The repeated occurence of bone fractures (implying an abnormally increased tendency for fracture)." [HPO:curators]
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 HP:0002797 Osteolysis 
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 HP:0002987 Elbow contractures 
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 HP:0003301 Irregular vertebral endplates "An irregular surface of the vertebral end plates, which are normally relatively smooth." [HPO:curators]
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 HP:0003765 Psoriasis 
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 HP:0003812 Phenotypic variability 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0004493 Craniofacial hyperostosis "Hyperostosis refers to a localized bone overgrowth process (as opposed to sclerosis, which refers to a generalized disturbance with increased bone density). This term is used for excessive growth of the craniofacial bones." [HPO:curators]
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 HP:0005200 Retroperitoneal fibrosis 
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 HP:0007380 Facial telangiectatic vessels "Telangiectases (small dilated blood vessels) located near the surface of the skin of the face." [HPO:curators]
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 HP:0008064 Ichthyosiform abnormality of the skin 
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 HP:0008065 Aplasia/Hypoplasia of the skin 
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 HP:0008479 Hypoplastic vertebral bodies 
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 HP:0008734 Decreased testicular size 
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 HP:0009125 Lipodystrophy "Degenerative changes of the fat tissue." [HPO:curators]
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 HP:0011001 Increased bone mineral density "An abnormal increase of bone mineral density, that is, of the amount of matter per cubic centimeter of bones which is often refered to as osteosclerosis. Osteosclerosis can be detected on radiological examination as an increased whiteness (density) of affected bones." [HPO:curators]
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 HP:0011025 Abnormality of cardiovascular system physiology "`Abnormal` (PATO:0000460) `functionality` (PATO:0001509) of the `cardiovascular system` (FMA:7161)." [HPO:probinson]
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 HP:0012385 Camptodactyly "The distal interphalangeal joint and/or the proximal interphalangeal joint of the fingers or toes cannot be extended to 180 degrees by either active or passive extension." [HPO:probinson]
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 HP:0012724 Upper eyelid edema "Edema in the region of the upper eyelid." [HPO:probinson]
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 HP:0025289 Cervical lymphadenopathy "Enlarged lymph nodes in the neck." []
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 HP:0030053 Stiff skin "An induration (hardening) of the skin" []
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 HP:0030084 Clinodactyly "An angulation of a digit at an interphalangeal joint in the plane of the palm (finger) or sole (toe)." [pmid:16252026]
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 HP:0100324 Scleroderma "A chronic autoimmune disease characterized by fibrosis (or hardening), vascular alterations, and autoantibodies." [HPO:sdoelken]
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 HP:0100534 Episcleritis 
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 HP:0100670 Rough bone trabeculation 
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 HP:0100727 Histiocystosis "An excessive number of histiocytes (tissue macrophages)." [HPO:sdoelken]
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 HP:0100776 Recurrent pharyngitis "An increased susceptibility to pharyngitis as manifested by a history of recurrent pharyngitis." [HPO:probinson]
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 HP:0100790 Hernia 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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