ENSG00000198270


Homo sapiens

Features
Gene ID: ENSG00000198270
  
Biological name :TMEM116
  
Synonyms : Q8NCL8 / TMEM116 / transmembrane protein 116
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: q24.13
Gene start: 111931282
Gene end: 112013185
  
Corresponding Affymetrix probe sets: 227172_at (Human Genome U133 Plus 2.0 Array)   234133_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000474027
Ensembl peptide - ENSP00000347620
Ensembl peptide - ENSP00000446491
Ensembl peptide - ENSP00000446516
Ensembl peptide - ENSP00000446766
Ensembl peptide - ENSP00000447425
Ensembl peptide - ENSP00000447731
Ensembl peptide - ENSP00000448413
Ensembl peptide - ENSP00000449163
Ensembl peptide - ENSP00000449774
Ensembl peptide - ENSP00000450060
Ensembl peptide - ENSP00000450377
NCBI entrez gene - 89894     See in Manteia.
RefSeq - XM_017020194
RefSeq - XM_011538950
RefSeq - XM_011538951
RefSeq - XM_011538953
RefSeq - XM_011538955
RefSeq - XM_011538957
RefSeq - XM_011538958
RefSeq - XM_017020187
RefSeq - XM_017020188
RefSeq - XM_017020189
RefSeq - XM_017020190
RefSeq - XM_017020191
RefSeq - XM_017020192
RefSeq - XM_017020193
RefSeq - NM_001193453
RefSeq - NM_001193531
RefSeq - NM_001294314
RefSeq - NM_138341
RefSeq - XM_006719678
RefSeq - XM_011538946
RefSeq - XM_011538947
RefSeq - XM_011538948
RefSeq - XM_011538949
RefSeq Peptide - NP_001281243
RefSeq Peptide - NP_612350
RefSeq Peptide - NP_001180382
RefSeq Peptide - NP_001180460
swissprot - F8W1L7
swissprot - G3V1Z3
swissprot - F8VP39
swissprot - Q8NCL8
swissprot - S4R388
swissprot - F8VNZ8
swissprot - F8VQZ8
swissprot - F8VRN7
swissprot - F8VWU6
Ensembl - ENSG00000198270
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 A2BGS3ENSDARG00000077155Danio rerio
 TMEM116ENSGALG00000004760Gallus gallus
 Tmem116ENSMUSG00000029452Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR022343  GCR1-cAMP receptor


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr