ENSG00000198538


Homo sapiens

Features
Gene ID: ENSG00000198538
  
Biological name :ZNF28
  
Synonyms : P17035 / zinc finger protein 28 / ZNF28
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: -1
Band: q13.41
Gene start: 52797409
Gene end: 52857600
  
Corresponding Affymetrix probe sets: 1567853_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000375661
Ensembl peptide - ENSP00000469381
Ensembl peptide - ENSP00000344777
Ensembl peptide - ENSP00000471448
Ensembl peptide - ENSP00000397693
Ensembl peptide - ENSP00000412143
NCBI entrez gene - 7576     See in Manteia.
RefSeq - XM_011527262
RefSeq - NM_006969
RefSeq - XM_006723354
RefSeq Peptide - NP_008900
swissprot - M0R0U4
swissprot - C9K0H3
swissprot - P17035
swissprot - F8WBV3
swissprot - M0QXU3
Ensembl - ENSG00000198538
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ZNF888 / zinc finger protein 888ENSG0000021379369
A2RRD8 / Q5VIY5 / ZNF468 / zinc finger protein 468ENSG0000020460465
Q8N4W9 / ZNF808 / zinc finger protein 808ENSG0000019848265
Q8N823 / ZNF611 / zinc finger protein 611ENSG0000021302062
Q6ZN06 / ZNF813 / zinc finger protein 813ENSG0000019834661
Q0VGE8 / ZNF816 / zinc finger protein 816ENSG0000018025759
A6NHJ4 / ZNF860 / zinc finger protein 860ENSG0000019738556
Q96N58 / ZNF578 / zinc finger protein 578ENSG0000025840554
Q7L2R6 / ZNF765 / zinc finger protein 765ENSG0000019641749
ZNF525 / zinc finger protein 525ENSG0000020332648
Q9NV72 / ZNF701 / zinc finger protein 701ENSG0000016756248
A2RRD8 / ZNF320 / zinc finger protein 320ENSG0000018298646
AC010487.3ENSG0000028308845
Q09FC8 / ZNF415 / zinc finger protein 415ENSG0000017095444
Q86XU0 / ZNF677 / zinc finger protein 677ENSG0000019792836
ZNF816-ZNF321P / ZNF816-ZNF321P readthroughENSG0000022187424


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036051  KRAB domain superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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