ENSG00000203896


Homo sapiens

Features
Gene ID: ENSG00000203896
  
Biological name :LIME1
  
Synonyms : Lck interacting transmembrane adaptor 1 / LIME1 / Q9H400
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: 1
Band: q13.33
Gene start: 63736283
Gene end: 63739103
  
Corresponding Affymetrix probe sets: 219541_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000414506
Ensembl peptide - ENSP00000482812
Ensembl peptide - ENSP00000478705
Ensembl peptide - ENSP00000477561
Ensembl peptide - ENSP00000476772
Ensembl peptide - ENSP00000309521
NCBI entrez gene - 54923     See in Manteia.
OMIM - 609809
RefSeq - NM_001305654
RefSeq - NM_001305655
RefSeq - NM_017806
RefSeq Peptide - NP_001292584
RefSeq Peptide - NP_060276
RefSeq Peptide - NP_001292583
swissprot - X6RKG5
swissprot - A0A087WUJ1
swissprot - A0A087WT39
swissprot - Q9H400
swissprot - V9GYI1
swissprot - A0A087WZP9
Ensembl - ENSG00000203896
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Lime1ENSMUSG00000090077Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
AL121845.2ENSG0000027304727


Protein motifs (from Interpro)
Interpro ID Name
 IPR026072  Lck-interacting transmembrane adapter 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000390 spliceosomal complex disassembly IBA
 biological_processGO:0002250 adaptive immune response IEA
 biological_processGO:0002376 immune system process IEA
 biological_processGO:0050852 T cell receptor signaling pathway IEA
 biological_processGO:0050853 B cell receptor signaling pathway IEA
 cellular_componentGO:0005615 extracellular space HDA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0071008 U2-type post-mRNA release spliceosomal complex IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr