ENSG00000213096


Homo sapiens

Features
Gene ID: ENSG00000213096
  
Biological name :ZNF254
  
Synonyms : O75437 / zinc finger protein 254 / ZNF254
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: 1
Band: p12
Gene start: 24033405
Gene end: 24129961
  
Corresponding Affymetrix probe sets: 206862_at (Human Genome U133 Plus 2.0 Array)   236133_x_at (Human Genome U133 Plus 2.0 Array)   242602_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000482703
Ensembl peptide - ENSP00000472863
Ensembl peptide - ENSP00000483222
Ensembl peptide - ENSP00000484930
Ensembl peptide - ENSP00000341573
Ensembl peptide - ENSP00000349494
Ensembl peptide - ENSP00000470845
NCBI entrez gene - 9534     See in Manteia.
OMIM - 604768
RefSeq - XM_017027519
RefSeq - NM_001278662
RefSeq - NM_001278663
RefSeq - NM_001278664
RefSeq - NM_001278665
RefSeq - NM_001278677
RefSeq - NM_001278678
RefSeq - NM_203282
RefSeq - XM_011528443
RefSeq - XM_011528444
RefSeq - XM_011528448
RefSeq - XM_017027514
RefSeq - XM_017027515
RefSeq - XM_017027516
RefSeq - XM_017027517
RefSeq - XM_017027518
RefSeq - NM_001278661
RefSeq Peptide - NP_001265592
RefSeq Peptide - NP_001265593
RefSeq Peptide - NP_001265594
RefSeq Peptide - NP_001265606
RefSeq Peptide - NP_001265607
RefSeq Peptide - NP_975011
RefSeq Peptide - NP_001265590
RefSeq Peptide - NP_001265591
swissprot - F5H2M4
swissprot - M0QZY2
swissprot - M0R2X5
swissprot - A0A087X0A2
swissprot - O75437
swissprot - Q7Z2R1
swissprot - A0A087WZJ7
Ensembl - ENSG00000213096
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CT573016.1ENSMUSG00000114923Mus musculus
 Zfp457ENSMUSG00000055341Mus musculus
 Zfp595ENSMUSG00000057842Mus musculus
 Zfp65ENSMUSG00000071281Mus musculus
 Zfp759ENSMUSG00000057396Mus musculus
 Zfp953ENSMUSG00000098905Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
A6NNF4 / ZNF726 / zinc finger protein 726ENSG0000021396776
ZNF43 / P17038 / zinc finger protein 43ENSG0000019852173
Q6ZR52 / ZNF493 / zinc finger protein 493ENSG0000019626870
Q86V71 / ZNF429 / zinc finger protein 429ENSG0000019701369
Q9UII5 / ZNF107 / zinc finger protein 107ENSG0000019624768
P0DKX0 / ZNF728 / zinc finger protein 728ENSG0000026906768
ZNF92 / Q03936 / zinc finger protein 92ENSG0000014675767
ZNF98 / A6NK75 / zinc finger protein 98ENSG0000019736065
Q96N22 / ZNF681 / zinc finger protein 681ENSG0000019617265
Q8N7Q3 / ZNF676 / zinc finger protein 676ENSG0000019610964
ZNF66 / Q6ZN08 / zinc finger protein 66ENSG0000016022963
ZNF85 / Q03923 / zinc finger protein 85ENSG0000010575063
P17019 / ZNF708 / zinc finger protein 708ENSG0000018214163
Q9Y2Q1 / ZNF257 / zinc finger protein 257ENSG0000019713462
Q8TD23 / ZNF675 / zinc finger protein 675ENSG0000019737261
Q9P255 / ZNF492 / zinc finger protein 492ENSG0000022967660
Q8TF32 / ZNF431 / zinc finger protein 431ENSG0000019670560
Q9H8G1 / ZNF430 / zinc finger protein 430ENSG0000011862060
O75373 / ZNF737 / zinc finger protein 737ENSG0000023744059
A8MTY0 / ZNF724 / zinc finger protein 724ENSG0000019608159


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036051  KRAB domain superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II TAS
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr