ENSG00000213930


Homo sapiens

Features
Gene ID: ENSG00000213930
  
Biological name :GALT
  
Synonyms : galactose-1-phosphate uridylyltransferase / GALT / P07902
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: 1
Band: p13.3
Gene start: 34638133
Gene end: 34651035
  
Corresponding Affymetrix probe sets: 203179_at (Human Genome U133 Plus 2.0 Array)   232708_at (Human Genome U133 Plus 2.0 Array)   242734_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000450942
Ensembl peptide - ENSP00000451756
Ensembl peptide - ENSP00000451435
Ensembl peptide - ENSP00000368119
Ensembl peptide - ENSP00000401956
Ensembl peptide - ENSP00000432839
Ensembl peptide - ENSP00000450419
NCBI entrez gene - 2592     See in Manteia.
OMIM - 606999
RefSeq - NM_000155
RefSeq - NM_001258332
RefSeq Peptide - NP_000146
RefSeq Peptide - NP_001245261
swissprot - A0A0S2Z3Y7
swissprot - P07902
swissprot - F2Z2X9
swissprot - G3V223
swissprot - G3V3U5
swissprot - H0YJL3
Ensembl - ENSG00000213930
  
Related genetic diseases (OMIM): 230400 - Galactosemia, 230400
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 galtENSDARG00000069543Danio rerio
 GALTENSGALG00000026195Gallus gallus
 GaltENSMUSG00000036073Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001937  Galactose-1-phosphate uridyl transferase, class I
 IPR005849  Galactose-1-phosphate uridyl transferase, N-terminal
 IPR005850  Galactose-1-phosphate uridyl transferase, C-terminal
 IPR019779  Galactose-1-phosphate uridyl transferase, class I His-active site
 IPR036265  HIT-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0006011 UDP-glucose metabolic process IDA
 biological_processGO:0006012 galactose metabolic process TAS
 biological_processGO:0006258 UDP-glucose catabolic process IEA
 biological_processGO:0019388 galactose catabolic process TAS
 biological_processGO:0033499 galactose catabolic process via UDP-galactose IEA
 cellular_componentGO:0005794 Golgi apparatus IDA
 cellular_componentGO:0005829 cytosol TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008108 UDP-glucose:hexose-1-phosphate uridylyltransferase activity EXP
 molecular_functionGO:0008270 zinc ion binding IDA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016779 nucleotidyltransferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Defective GALT can cause Galactosemia
Galactose catabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000137 Abnormality of the ovaries 
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000815 Hypergonadotropic hypogonadism "Reduced function of the gonads (testes in males or ovaries in females) associated with excess pituitary gonadotropin secretion and resulting in delayed sexual development and growth delay." [HPO:curators]
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 HP:0000868 Decreased fertility in females 
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 HP:0000939 Osteoporosis "Osteoporosis is a systemic skeletal disease characterized by low bone density and microarchitectural deterioration of bone tissue with a consequent increase in bone fragility. According to the WHO, osteoporosis is characterized by a value of BMD 2.5 standard deviations or more below the young adult mean." [HPO:curators]
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 HP:0000952 Jaundice "Yellow pigmentation of the skin or sclera due to bilirubin, which in turn is the result of increased bilirubin concentration in the bloodstream." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001254 Lethargy 
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
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 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
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 HP:0001394 Cirrhosis 
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 HP:0001399 Hepatic failure 
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 HP:0001410 Decreased liver function 
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 HP:0001508 Failure to thrive 
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 HP:0001824 Weight loss 
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 HP:0001878 Hemolytic anemia 
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 HP:0001892 Bleeding diathesis "An abnormal susceptibility to bleeding because of a defect in coagulation." [HPO:curators]
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 HP:0001942 Metabolic acidosis 
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 HP:0001943 Hypoglycemia "A lower than normal level of blood glucose." [HPO:curators]
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 HP:0002013 Vomiting 
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 HP:0002014 Diarrhea 
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 HP:0002017 Nausea and vomiting 
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0003355 Abnormal urinary amino-acid findings 
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 HP:0003811 Neonatal death 
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 HP:0004915 impaired galactose metabolism 
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 HP:0004918 hyperchloremic metabolic acidosis 
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 HP:0008209 Premature ovarian failure 
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 HP:0009088 Speech articulation difficulties 
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 HP:0011098 Speech apraxia "A type of apraxia that is characterized by difficulty or inability to execute speech movements because of problems with coordination and motor problems, leading to incorrect articulation. An increase of errors with increasing word and phrase length may occur." [HPO:probinson]
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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 HP:0012023 Galactosuria "Elevated concentration of `galactose` (CHEBI:28260) in the urine." [HPO:probinson]
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 HP:0012024 Hypergalactosemia "Elevated concentration of `galactose` (CHEBI:28260) in the blood." [HPO:probinson]
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 HP:0100806 Sepsis 
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 HP:0410061 Increased level of galactitol in plasma "An increase in the level of galactitol in the plasma." [PMID:11092512, PMID:7671965]
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 HP:0410062 Increased level of galactitol in urine "An increase in the level of galactitol in the urine." [PMID:11092512, PMID:7671965]
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 HP:0410063 Increased level of galactonate in red blood cells "An increase in the level of galactonate in the red blood cells." [PMID:14680973]
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 HP:0410064 Increased level of galactitol in red blood cells "An increase in the level of galactitol in the red blood cells." [PMID:14680973]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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