ENSG00000221923


Homo sapiens

Features
Gene ID: ENSG00000221923
  
Biological name :ZNF880
  
Synonyms : Q6PDB4 / zinc finger protein 880 / ZNF880
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: 1
Band: q13.41
Gene start: 52369917
Gene end: 52385795
  
Corresponding Affymetrix probe sets: 232315_at (Human Genome U133 Plus 2.0 Array)   235913_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000343625
Ensembl peptide - ENSP00000406318
Ensembl peptide - ENSP00000414470
Ensembl peptide - ENSP00000471067
Ensembl peptide - ENSP00000471324
NCBI entrez gene - 400713     See in Manteia.
RefSeq - XM_017026812
RefSeq - NM_001145434
RefSeq Peptide - NP_001138906
swissprot - F5H026
swissprot - Q6PDB4
swissprot - M0R0M5
Ensembl - ENSG00000221923
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q3MIS6 / ZNF528 / zinc finger protein 528ENSG0000016755570
Q8WV37 / ZNF480 / zinc finger protein 480ENSG0000019846459
Q5HY98 / ZNF766 / zinc finger protein 766ENSG0000019621450
Q8N9Z0 / ZNF610 / zinc finger protein 610ENSG0000016755448
ZNF761 / zinc finger protein 761ENSG000001603367


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036051  KRAB domain superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IBA
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr