ENSG00000243232


Homo sapiens

Features
Gene ID: ENSG00000243232
  
Biological name :PCDHAC2
  
Synonyms : PCDHAC2 / protocadherin alpha subfamily C, 2 / Q9Y5I4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: 1
Band: q31.3
Gene start: 140966235
Gene end: 141012344
  
Corresponding Affymetrix probe sets: 210674_s_at (Human Genome U133 Plus 2.0 Array)   223435_s_at (Human Genome U133 Plus 2.0 Array)   224212_s_at (Human Genome U133 Plus 2.0 Array)   224539_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000289269
Ensembl peptide - ENSP00000478629
NCBI entrez gene - 56134     See in Manteia.
OMIM - 606321
RefSeq - NM_018899
RefSeq - NM_031883
RefSeq Peptide - NP_061722
RefSeq Peptide - NP_114089
swissprot - Q9Y5I4
Ensembl - ENSG00000243232
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pcdh2acENSDARG00000101318Danio rerio
 pcdh2acENSDARG00000099783Danio rerio
 ENSGALG00000038693Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9H158 / PCDHAC1 / protocadherin alpha subfamily C, 1ENSG0000024838336


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR030726  Protocadherin alpha-C2
 IPR031904  Cadherin, C-terminal catenin-binding domain
 IPR032455  Cadherin, cytoplasmic C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion TAS
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007267 cell-cell signaling IBA
 biological_processGO:0007399 nervous system development TAS
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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