ENSG00000251369


Homo sapiens

Features
Gene ID: ENSG00000251369
  
Biological name :ZNF550
  
Synonyms : Q7Z398 / zinc finger protein 550 / ZNF550
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: -1
Band: q13.43
Gene start: 57535257
Gene end: 57559863
  
Corresponding Affymetrix probe sets: 215124_at (Human Genome U133 Plus 2.0 Array)   228099_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000469679
Ensembl peptide - ENSP00000472973
Ensembl peptide - ENSP00000422344
Ensembl peptide - ENSP00000445978
Ensembl peptide - ENSP00000446224
Ensembl peptide - ENSP00000469537
Ensembl peptide - ENSP00000469580
NCBI entrez gene - 162972     See in Manteia.
RefSeq - XM_017026401
RefSeq - NM_001277090
RefSeq - NM_001277091
RefSeq - NM_001277092
RefSeq - NM_001277093
RefSeq - XM_011526567
RefSeq - XM_011526568
RefSeq Peptide - NP_001264019
RefSeq Peptide - NP_001264020
RefSeq Peptide - NP_001264021
RefSeq Peptide - NP_001264022
swissprot - Q7Z398
swissprot - A0A0C4DGB4
swissprot - M0QWZ8
swissprot - M0R337
Ensembl - ENSG00000251369
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q5CZA5 / ZNF805 / zinc finger protein 805ENSG0000020452461
Q08ER8 / ZNF543 / zinc finger protein 543ENSG0000017822959
Q96NL3 / ZNF599 / zinc finger protein 599ENSG0000015389655
Q14592 / ZNF460 / zinc finger protein 460ENSG0000019771454
O43296 / ZNF264 / zinc finger protein 264ENSG0000008384452
ZNF80 / P51504 / zinc finger protein 80ENSG0000017425534


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036051  KRAB domain superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr