ENSG00000254004


Homo sapiens

Features
Gene ID: ENSG00000254004
  
Biological name :ZNF260
  
Synonyms : Q3ZCT1 / zinc finger protein 260 / ZNF260
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: -1
Band: q13.12
Gene start: 36510695
Gene end: 36528660
  
Corresponding Affymetrix probe sets: 1558700_s_at (Human Genome U133 Plus 2.0 Array)   228920_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000429803
Ensembl peptide - ENSP00000464964
Ensembl peptide - ENSP00000465834
Ensembl peptide - ENSP00000467219
NCBI entrez gene - 339324     See in Manteia.
OMIM - 613749
RefSeq - XM_017026741
RefSeq - NM_001012756
RefSeq - NM_001166036
RefSeq - NM_001166037
RefSeq - NM_001166038
RefSeq - XM_011526897
RefSeq Peptide - NP_001159509
RefSeq Peptide - NP_001159510
RefSeq Peptide - NP_001012774
RefSeq Peptide - NP_001159508
swissprot - Q3ZCT1
Ensembl - ENSG00000254004
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:dkey-210j14.3ENSDARG00000089883Danio rerio
 si:dkey-210j14.4ENSDARG00000090871Danio rerio
 Q62513ENSMUSG00000049421Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q15072 / ZNF146 / zinc finger protein 146ENSG0000016763557


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type
 IPR017114  C2H2-type Zinc finger protein, YY-1-like
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IBA
 biological_processGO:0007275 multicellular organism development IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005829 cytosol IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr